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Aldolase A

From Wikipedia, the free encyclopedia

Mammalian protein found in Homo sapiens
ALDOA
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1ALD,2ALD,4ALD

Identifiers
AliasesALDOA, ALDA, GSD12, HEL-S-87p, aldolase, fructose-bisphosphate A, Aldolase A
External IDsOMIM:103850;MGI:87994;HomoloGene:141054;GeneCards:ALDOA;OMA:ALDOA - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for ALDOA
Genomic location for ALDOA
Band16p11.2Start30,064,164bp[1]
End30,070,457bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for ALDOA
Genomic location for ALDOA
Band7|7 F3Start126,394,406bp[2]
End126,399,923bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gastrocnemius muscle

  • muscle of thigh

  • skeletal muscle tissue

  • superior frontal gyrus

  • apex of heart

  • prefrontal cortex

  • right frontal lobe

  • primary visual cortex

  • left ventricle

  • right auricle
Top expressed in
  • medial head of gastrocnemius muscle

  • ankle

  • vastus lateralis muscle

  • triceps brachii muscle

  • sternocleidomastoid muscle

  • temporal muscle

  • digastric muscle

  • masseter muscle

  • tibialis anterior muscle

  • knee joint
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

226

11674

Ensembl

ENSG00000149925

ENSMUSG00000030695

UniProt

P04075

P05064

RefSeq (mRNA)
NM_000034
NM_001127617
NM_001243175
NM_001243177
NM_184041

NM_184043
NM_001355562
NM_001355563
NM_001355564
NM_001355565

NM_001177307
NM_001177308
NM_007438

RefSeq (protein)

NP_001121089
NP_001230106
NP_908930
NP_908932

NP_001170778
NP_001170779
NP_031464

Location (UCSC)Chr 16: 30.06 – 30.07 MbChr 7: 126.39 – 126.4 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse
fructose-bisphosphate aldolase
Identifiers
EC no.4.1.2.13
CAS no.9024-52-6
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDBPDBePDBsum
Gene OntologyAmiGO /QuickGO
Search
PMCarticles
PubMedarticles
NCBIproteins

Aldolase A (ALDOA, orALDA), also known as fructose-bisphosphate aldolase, is anenzyme that in humans is encoded by theALDOA gene on chromosome 16.

The protein encoded by this gene is aglycolytic enzyme that catalyzes the reversible conversion offructose-1,6-bisphosphate toglyceraldehyde 3-phosphate (G3P) anddihydroxyacetone phosphate (DHAP). Threealdolase isozymes (A, B, and C), encoded by three different genes, are differentially expressed during development. Aldolase A is found in the developing embryo and is produced in even greater amounts in adult muscle. Aldolase A expression is repressed in adult liver, kidney and intestine and similar toaldolase C levels in brain and other nervous tissue. Aldolase A deficiency has been associated withmyopathy andhemolytic anemia.Alternative splicing and alternative promoter usage results in multiple transcript variants. Relatedpseudogenes have been identified on chromosomes 3 and 10.[5]

Structure

[edit]

ALDOA is ahomotetramer and one of the three aldolase isozymes (A, B, and C), encoded by three different genes.[6][7] TheALDOA gene contains 8exons and the5'UTR IB.[7] Keyamino acids responsible for its catalytic function have been identified. Theresidue Tyr363 functions as the acid–base catalyst for protonating C3 of thesubstrate, while Lys146 is proposed to stabilize the negative charge of the resultingconjugate base of Tyr363 and the strained configuration of theC-terminal. Residue Glu187 participates in multiple functions, including FBP aldolase catalysis, acid–base catalysis during substrate binding,dehydration, and substrate cleavage.[8] Though ALDOA localizes to the nucleus, it lacks any knownnuclear localization signals (NLS).[9]

Mechanism

[edit]

In mammalian aldolase, the key catalyticamino acid residues involved in the reaction arelysine andtyrosine. The tyrosine acts as an efficient hydrogen acceptor while the lysine covalently binds and stabilizes the intermediates. Manybacteria use twomagnesiumions in place of the lysine.[citation needed]

The reaction mechanism of aldolase.
The enzyme's reactive site amino acid's side-chains are shown inblue.
Abbreviations: DHAP - dihydroxyacetone phosphate; Fru1,6bP - Fructose-1,6-bisphosphate; GAD - glyceraldehyde 3-phosphate;
β-D-fructose 1,6-phosphatefructose-bisphosphate aldolaseD-glyceraldehyde 3-phosphatedihydroxyacetone phosphate
+

CompoundC05378 atKEGG Pathway Database.Enzyme4.1.2.13 atKEGG Pathway Database.CompoundC00111 atKEGG Pathway Database.CompoundC00118 atKEGG Pathway Database.

The numbering of the carbon atoms indicates the fate of the carbons according to their position in fructose 6-phosphate.

Function

[edit]

ALDOA is a key enzyme in the fourth step of glycolysis, as well as in the reverse pathwaygluconeogenesis. It catalyzes the reversible conversion of fructose-1,6-bisphosphate to glyceraldehydes-3-phosphate and dihydroxyacetone phosphate byaldol cleavage of the C3–C4 bond. As a result, it is a crucial player inATPbiosynthesis.[6][8][9][10][11] ALDOA also contributes to other "moonlighting" functions such as muscle maintenance, regulation of cell shape and motility,striated musclecontraction,actincytoskeleton organization, and regulation of cell proliferation.[6][9][10] ALDOA likely regulates actin cytoskeleton remodeling through interacting withcytohesin-2 (ARNO) and Arf6.[10]

ALDOA is ubiquitously expressed in most tissues, though it is predominantly expressed in developing embryo and adult muscle.[6][11] Inlymphocytes, ALDOA is the predominant aldolase isoform.[11] Within the cell, ALDOA typicallylocalizes to thecytoplasm, but it can localize to thenucleus duringDNA synthesis of thecell cycle S phase. This nuclear localization is regulated by the proteinkinasesAKT andp38. It is suggested that the nucleus serves as a reservoir for ALDOA in low glucose conditions.[9] ALDOA has also been found inmitochondria.[11]

ALDOA is regulated by the energy metabolism substratesglucose,lactate, andglutamine.[9] In humanmast cells (MCs), ALDOA has been observed to undergo post-translational regulation by proteintyrosinenitration, which may alter its relativeaffinity forFBP and/orIP3. This change then affects IP3 and PLCsignaling cascades in IgE-dependent responses.[11]

Clinical significance

[edit]

Aldolase A (ALDOA) is highly expressed in multiple cancers, includinglung squamous cell carcinoma (LSCC),renal cancer, andhepatocellular carcinoma. It is proposed that ALDOA overexpression enhances glycolysis in these tumor cells, promoting their growth. In LSCC, its upregulation correlates withmetastasis and poor prognosis, while its downregulation reduces tumor cell motility andtumorigenesis. Thus, ALDOA could be a potential LSCCbiomarker and therapeutic drug target.[6]

Aldolase A deficiency is a rare,autosomalrecessive disorder that is linked tohemolysis and accompanied by weakness, muscle pain, andmyopathy.[7]

Interactive pathway map

[edit]

Click on genes, proteins and metabolites below to link to respective articles.[§ 1]

  1. ^The interactive pathway map can be edited at WikiPathways:"GlycolysisGluconeogenesis_WP534".

Interactions

[edit]

Aldolase A has been shown tointeract with:

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000149925Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000030695Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"Entrez Gene: ALDOA aldolase A, fructose-bisphosphate".
  6. ^abcdeDu S, Guan Z, Hao L, Song Y, Wang L, Gong L, Liu L, Qi X, Hou Z, Shao S (2014)."Fructose-bisphosphate aldolase a is a potential metastasis-associated marker of lung squamous cell carcinoma and promotes lung cell tumorigenesis and migration".PLOS ONE.9 (1): e85804.Bibcode:2014PLoSO...985804D.doi:10.1371/journal.pone.0085804.PMC 3900443.PMID 24465716.
  7. ^abcYao DC, Tolan DR, Murray MF, Harris DJ, Darras BT, Geva A, Neufeld EJ (15 March 2004)."Hemolytic anemia and severe rhabdomyolysis caused by compound heterozygous mutations of the gene for erythrocyte/muscle isozyme of aldolase, ALDOA(Arg303X/Cys338Tyr)".Blood.103 (6):2401–3.doi:10.1182/blood-2003-09-3160.PMID 14615364.
  8. ^abTittmann K (December 2014). "Sweet siblings with different faces: the mechanisms of FBP and F6P aldolase, transaldolase, transketolase and phosphoketolase revisited in light of recent structural data".Bioorganic Chemistry.57:263–80.doi:10.1016/j.bioorg.2014.09.001.PMID 25267444.
  9. ^abcdeMamczur P, Gamian A, Kolodziej J, Dziegiel P, Rakus D (December 2013). "Nuclear localization of aldolase A correlates with cell proliferation".Biochimica et Biophysica Acta (BBA) - Molecular Cell Research.1833 (12):2812–22.doi:10.1016/j.bbamcr.2013.07.013.PMID 23886627.
  10. ^abcdeMerkulova M, Hurtado-Lorenzo A, Hosokawa H, Zhuang Z, Brown D, Ausiello DA, Marshansky V (June 2011)."Aldolase directly interacts with ARNO and modulates cell morphology and acidic vesicle distribution".American Journal of Physiology. Cell Physiology.300 (6): C1442-55.doi:10.1152/ajpcell.00076.2010.PMC 3118619.PMID 21307348.
  11. ^abcdefgSekar Y, Moon TC, Slupsky CM, Befus AD (1 July 2010)."Protein tyrosine nitration of aldolase in mast cells: a plausible pathway in nitric oxide-mediated regulation of mast cell function".Journal of Immunology.185 (1):578–87.doi:10.4049/jimmunol.0902720.PMID 20511553.
  12. ^Kim JH, Lee Sukmook, Kim Jung Hwan, Lee Taehoon G, Hirata Masato,Suh Pann-Ghill, Ryu Sung Ho (Mar 2002). "Phospholipase D2 directly interacts with aldolase via Its PH domain".Biochemistry.41 (10). United States:3414–21.doi:10.1021/bi015700a.ISSN 0006-2960.PMID 11876650.
  13. ^abcdSt-Jean M, Izard T, Sygusch J (11 May 2007)."A hydrophobic pocket in the active site of glycolytic aldolase mediates interactions with Wiskott-Aldrich syndrome protein".The Journal of Biological Chemistry.282 (19):14309–15.doi:10.1074/jbc.m611505200.PMID 17329259.

Further reading

[edit]

External links

[edit]
PDB gallery
  • 1ado: FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT MUSCLE
    1ado: FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT MUSCLE
  • 1ald: ACTIVITY AND SPECIFICITY OF HUMAN ALDOLASES
    1ald: ACTIVITY AND SPECIFICITY OF HUMAN ALDOLASES
  • 1ewd: FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT MUSCLE
    1ewd: FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT MUSCLE
  • 1ewe: Fructose 1,6-Bisphosphate Aldolase from Rabbit Muscle
    1ewe: Fructose 1,6-Bisphosphate Aldolase from Rabbit Muscle
  • 1ewg:
    1ewg:
  • 1ex5: FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT MUSCLE
    1ex5: FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT MUSCLE
  • 1j4e: FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE COVALENTLY BOUND TO THE SUBSTRATE DIHYDROXYACETONE PHOSPHATE
    1j4e: FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE COVALENTLY BOUND TO THE SUBSTRATE DIHYDROXYACETONE PHOSPHATE
  • 1zah: Fructose-1,6-bisphosphate aldolase from rabbit muscle
    1zah: Fructose-1,6-bisphosphate aldolase from rabbit muscle
  • 1zai: Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from rabbit muscle
    1zai: Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from rabbit muscle
  • 1zaj: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with mannitol-1,6-bisphosphate, a competitive inhibitor
    1zaj: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with mannitol-1,6-bisphosphate, a competitive inhibitor
  • 1zal: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with partially disordered tagatose-1,6-bisphosphate, a weak competitive inhibitor
    1zal: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with partially disordered tagatose-1,6-bisphosphate, a weak competitive inhibitor
  • 2ald: HUMAN MUSCLE ALDOLASE
    2ald: HUMAN MUSCLE ALDOLASE
  • 2ot0: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with a C-terminal peptide of Wiskott-Aldrich syndrome protein
    2ot0: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with a C-terminal peptide of Wiskott-Aldrich syndrome protein
  • 2ot1: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with naphthol AS-E phosphate, a competitive inhibitor
    2ot1: Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with naphthol AS-E phosphate, a competitive inhibitor
  • 4ald: HUMAN MUSCLE FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE COMPLEXED WITH FRUCTOSE 1,6-BISPHOSPHATE
    4ald: HUMAN MUSCLE FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE COMPLEXED WITH FRUCTOSE 1,6-BISPHOSPHATE
  • 6ald: RABBIT MUSCLE ALDOLASE A/FRUCTOSE-1,6-BISPHOSPHATE COMPLEX
    6ald: RABBIT MUSCLE ALDOLASE A/FRUCTOSE-1,6-BISPHOSPHATE COMPLEX
Carbon–carbonlyases (EC 4.1)
4.1.1:Carboxy-lyases
4.1.2:Aldehyde-lyases
4.1.3:Oxo-acid-lyases
4.1.99: Other
Glycolysis
Gluconeogenesis only
tooxaloacetate:
fromlactate (Cori cycle):
fromalanine (Alanine cycle):
fromglycerol:
Regulatory
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