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achaete-scute complex

From Wikipedia, the free encyclopedia
Drosophila melanogaster genes
Protein family
Achaete-scute-related
Identifiers
SymbolMASH1/Ascl1a-like
InterProIPR015660
Achaete-scute complex protein T5
Identifiers
OrganismDrosophila melanogaster
Symbolac
UniProtP10083
Search for
StructuresSwiss-model
DomainsInterPro
Achaete-scute complex protein T4
Identifiers
OrganismDrosophila melanogaster
Symbolsc
UniProtP10084
Search for
StructuresSwiss-model
DomainsInterPro
Achaete-scute complex protein T3
Identifiers
OrganismDrosophila melanogaster
Symboll(1)sc
UniProtP09774
Search for
StructuresSwiss-model
DomainsInterPro
Achaete-scute complex protein T8
Identifiers
OrganismDrosophila melanogaster
Symbolase
UniProtP09775
Search for
StructuresSwiss-model
DomainsInterPro

Theachaete-scute complex (AS-C) is a group of four genes (achaete,scute,lethal of scute, andasense) in the fruit flyDrosophila melanogaster. These genes encodebasic helix-loop-helixtranscription factors that have been best studied in their regulation of nervous system development.[1][2] Because of their role in specifying neuroblast fate, the genes of theAS-C are called proneural genes. However, theAS-C has non-proneural functions, such as specifying muscle and gut progenitors.[1] Homologues ofAS-C in other animals, including humans and other vertebrates, have similar functions.

Genes of theAS-C interact with theNotch pathway in both their proneural functions as well as their specification of gut and muscle cells.[1]

Genetic structure

[edit]

The complex is found near the tip of the X chromosome, just 3' ofyellow, in chromosome bands 1A6 through 1B3. It occupies around 93kb of the genome, with all four genes oriented in the same direction.

achaete

[edit]

The 5′-most gene of the achaete-scute complex,achaete (short formac), is a small gene of less than 1000 bp. The Achaete protein is 201amino acids long and has a relative size of 23kDa.[3] As with most classically describedDrosophila genes,achaete is named for its mutant phenotype, which is the lack of sensory hairs (macrochaetae and microchaetae) on the back of the adult fly. Achaete functions to specify sensory hair cell fate. It functions downstream of other genes, includinghairy andextramacrochaete, that set up fields of cells that may expressachaete.

scute

[edit]

Scute (short formsc) is found in about 25 kb (3)′ ofachaete. It is a 1.45 kb gene encoding a 345 aa protein of 38.2 kDa.[4]

lethal or scute

[edit]

lethal or scute (short forml(1)sc) is found about 12 kb 3′ ofscute. It is a 1.1 kb gene encoding a 257 aa protein of 29 kDa.[5]

asense

[edit]

asense (short formase) found 45 kb 3′ ofl(1)sc. It is a 2.8 kb gene encoding a 486 aa protein of 53.2 kDa.[6]

See also

[edit]
  • ASCL1 :- Achaete-scute homolog 1
  • ASCL2 :- Achaete-scute homolog 2

References

[edit]
  1. ^abcGarcía-Bellido A, de Celis JF (July 2009)."The complex tale of the achaete-scute complex: a paradigmatic case in the analysis of gene organization and function during development".Genetics.182 (3):631–9.doi:10.1534/genetics.109.104083.PMC 2710146.PMID 19622761.
  2. ^"Achaete-scute complex". Retrieved2009-11-29.
  3. ^"FlyBase achaete report". Retrieved2009-11-29.
  4. ^"FlyBase scute report". Retrieved2009-11-29.
  5. ^"FlyBase lethal of scute report". Retrieved2009-11-29.
  6. ^"FlyBase asense report". Retrieved2009-11-29.
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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