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ATP1A3

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
ATP1A3
Identifiers
AliasesATP1A3, AHC2, DYT12, RDP, CAPOS, ATPase Na+/K+ transporting subunit alpha 3, ATP1A1, DEE99
External IDsOMIM:182350;MGI:88107;HomoloGene:113729;GeneCards:ATP1A3;OMA:ATP1A3 - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for ATP1A3
Genomic location for ATP1A3
Band19q13.2Start41,966,582bp[1]
End41,997,497bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for ATP1A3
Genomic location for ATP1A3
Band7 A3|7 13.73 cMStart24,677,592bp[2]
End24,705,383bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • superior frontal gyrus

  • primary visual cortex

  • right hemisphere of cerebellum

  • prefrontal cortex

  • apex of heart

  • dorsolateral prefrontal cortex

  • right frontal lobe

  • Brodmann area 9

  • hypothalamus

  • anterior cingulate cortex
Top expressed in
  • primary visual cortex

  • dentate gyrus of hippocampal formation granule cell

  • neural layer of retina

  • superior frontal gyrus

  • subiculum

  • dorsomedial hypothalamic nucleus

  • pontine nuclei

  • cerebellar cortex

  • dorsal tegmental nucleus

  • habenula
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

478

232975

Ensembl

ENSG00000105409

ENSMUSG00000040907

UniProt

P13637

Q6PIC6

RefSeq (mRNA)

NM_001256213
NM_001256214
NM_152296

NM_001290469
NM_144921
NM_001374627

RefSeq (protein)

NP_001243142
NP_001243143
NP_689509

NP_001277398
NP_001361556

Location (UCSC)Chr 19: 41.97 – 42 MbChr 7: 24.68 – 24.71 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Sodium/potassium-transporting ATPase subunit alpha-3 is anenzyme that in humans is encoded by theATP1A3gene.[5][6]

Function

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Theprotein encoded by this gene belongs to the family ofP-typecation transportATPases, and to the subfamily ofNa+/K+-ATPases. Na+/K+-ATPase is an integralmembrane protein responsible for establishing and maintaining theelectrochemical gradients ofNa andK ions across theplasma membrane. These gradients are essential forosmoregulation, for sodium-coupledtransport of a variety oforganic andinorganic molecules, and forelectrical excitability ofnerve andmuscle. Thisenzyme is composed of two subunits, a largecatalytic subunit (alpha) and a smallerglycoprotein subunit (beta). The catalytic subunit of Na+/K+-ATPase is encoded by multiple genes. This gene encodes an alpha 3 subunit.[6] ATP1A3 is expressed early in human development, likely underlying pathophysiology related to several ATP1A3 related diseases.[7]

Clinical significance

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Disease causing variants of theATP1A3 gene are known to cause a variety of movement disorders and epilepsies.[8] The known associations include a variety of syndromes, in approximate order of presentation:

  1. Malformation of Cortex Development, includingpolymicrogyria;[7]
  2. Developmental and epileptic encephalopathy 99 (DEE99);[9]
  3. Alternating hemiplegia of childhood 2 (AHC2);[10]
  4. Cerebellar ataxia, Areflexia, Pes cavus, Optic atrophy and Sensorineural hearing loss (CAPOS/CAOS syndrome);
  5. Very early-onsetschizophrenia;[11]
  6. Rapid-onset dystonia parkinsonism (RDP, also known as DYT12);
  7. Fever-induced paroxysmal weakness and encephalopathy (FIPWE);
  8. Recurrent episodes ofcerebellar ataxia (RECA).

In mice, mutations in this gene are associated withepilepsy. By manipulating this gene in the offspring of such mice, epilepsy can be avoided.[12]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000105409Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000040907Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Brashear A, Dobyns WB, de Carvalho Aguiar P, Borg M, Frijns CJ, Gollamudi S, Green A, Guimaraes J, Haake BC, Klein C, Linazasoro G, Münchau A, Raymond D, Riley D, Saunders-Pullman R, Tijssen MA, Webb D, Zaremba J, Bressman SB, Ozelius LJ (Mar 2007)."The phenotypic spectrum of rapid-onset dystonia-parkinsonism (RDP) and mutations in the ATP1A3 gene".Brain.130 (Pt 3):828–35.doi:10.1093/brain/awl340.PMID 17282997.
  6. ^ab"Entrez Gene: ATP1A3 ATPase, Na+/K+ transporting, alpha 3 polypeptide".
  7. ^abSmith RS, Florio M, Akula SK, Neil JE, Wang Y, Hill RS, et al. (2021-06-22)."Early role for a Na + ,K + -ATPase ( ATP1A3 ) in brain development".Proceedings of the National Academy of Sciences.118 (25) e2023333118.Bibcode:2021PNAS..11823333S.doi:10.1073/pnas.2023333118.PMC 8237684.PMID 34161264.
  8. ^Papandreou A, Danti FR, Spaull R, Leuzzi V, Mctague A, Kurian MA (February 2020)."The expanding spectrum of movement disorders in genetic epilepsies".Developmental Medicine and Child Neurology.62 (2):178–191.doi:10.1111/dmcn.14407.PMID 31784983.S2CID 208498567.
  9. ^"UniProt".www.uniprot.org. Retrieved2023-10-31.
  10. ^"UniProt".
  11. ^Smedemark-Margulies N, Brownstein CA, Vargas S, Tembulkar SK, Towne MC, Shi J, Gonzalez-Cuevas E, Liu KX, Bilguvar K, Kleiman RJ, Han MJ, Torres A, Berry GT, Yu TW, Beggs AH, Agrawal PB, Gonzalez-Heydrich J (September 2016)."A novel de novo mutation in ATP1A3 and childhood-onset schizophrenia".Cold Spring Harbor Molecular Case Studies.2 (5) a001008.doi:10.1101/mcs.a001008.PMC 5002930.PMID 27626066.
  12. ^Clapcote SJ, Duffy S, Xie G, Kirshenbaum G, Bechard AR, Rodacker Schack V, Petersen J, Sinai L, Saab BJ, Lerch JP, Minassian BA, Ackerley CA, Sled JG, Cortez MA, Henderson JT, Vilsen B, Roder JC (August 2009)."Mutation I810N in the alpha3 isoform of Na+,K+-ATPase causes impairments in the sodium pump and hyperexcitability in the CNS".Proc. Natl. Acad. Sci. U.S.A.106 (33):14085–90.Bibcode:2009PNAS..10614085C.doi:10.1073/pnas.0904817106.PMC 2729024.PMID 19666602.

Further reading

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External links

[edit]
3.6.1
3.6.2
3.6.3-4:ATPase
3.6.3
Cu++ (3.6.3.4)
Ca+ (3.6.3.8)
Na+/K+ (3.6.3.9)
H+/K+ (3.6.3.10)
OtherP-type ATPase
3.6.4
3.6.5:GTPase
3.6.5.1:Heterotrimeric G protein
3.6.5.2:Small GTPase >Ras superfamily
3.6.5.3:Protein-synthesizing GTPase
3.6.5.5-6:Polymerization motors
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