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SEMA7A

From Wikipedia, the free encyclopedia

Protein-coding gene in the species Homo sapiens
SEMA7A
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

3NVQ

Identifiers
AliasesSEMA7A, CD108, CDw108, H-SEMA-K1, H-Sema-L, JMH, SEMAK1, SEMAL, semaphorin 7A (John Milton Hagen blood group), PFIC11
External IDsOMIM:607961;MGI:1306826;HomoloGene:2678;GeneCards:SEMA7A;OMA:SEMA7A - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for SEMA7A
Genomic location for SEMA7A
Band15q24.1Start74,409,289bp[1]
End74,433,958bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for SEMA7A
Genomic location for SEMA7A
Band9|9 BStart57,847,395bp[2]
End57,870,148bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • spleen

  • C1 segment

  • primary visual cortex

  • placenta

  • right hemisphere of cerebellum

  • prefrontal cortex

  • stromal cell of endometrium

  • superior frontal gyrus

  • Brodmann area 9

  • right frontal lobe
Top expressed in
  • cumulus cell

  • cerebellar cortex

  • primary visual cortex

  • superior frontal gyrus

  • lumbar subsegment of spinal cord

  • anterior horn of spinal cord

  • dentate gyrus of hippocampal formation granule cell

  • primary motor cortex

  • lateral geniculate nucleus

  • lobe of cerebellum
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8482

20361

Ensembl

ENSG00000138623
ENSG00000288455

ENSMUSG00000038264

UniProt

O75326

Q9QUR8

RefSeq (mRNA)

NM_003612
NM_001146029
NM_001146030

NM_011352

RefSeq (protein)

NP_001139501
NP_001139502
NP_003603

NP_035482

Location (UCSC)Chr 15: 74.41 – 74.43 MbChr 9: 57.85 – 57.87 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) (SEMA7A) also known asCD108 (Cluster ofDifferentiation 108), is a humangene.[5]

SEMA7A is a membrane-boundsemaphorin that associates with cell surfaces via a glycosylphosphatidylinositol (GPI) linkage. SEMA7A is also known as the John-Milton-Hagen (JMH) blood group antigen, an 80-kD glycoprotein expressed on activatedlymphocytes anderythrocytes.[supplied by OMIM][5] SEMA7A is expressed in various adult tissues such as adipose, colon, esophagus, heart, brain, spleen, testis, lung, ovary, and uterus.[6]

Development

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SEMA7A promotes axonal growth and is involved inmesoderm derived somite formation. Murine embryonic Sema7A expression is highest on day 7, which is indicative of its role on the differentiation of germ layer structure.[7] Embryonic Sema7A expression is noticeable at all developmental stages as well as in the newborn and adult thymus, indicative of a development T-cell role.[7] In wild type neurons, addition of Sema7A underin vitro conditions promotes elongation and branching in a dose dependent manner.[8] Unlike the majority of semaphorins, SEMA7A enhances axonal growth and is imperative for proper embryonic axonal tract formation.[9] Limited expression of SEMA7A is found in the hindbrain as opposed to an abundance of SEMA7A expression found in both the cranial and trunk neural crest cells, which indicates an involvement in migration and differentiation.[10] Sema7A -/- mice show defects in olfactory tract development.[11]

Tumorigenesis

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In normal breast tissue, mRNA expression of SEMA7A is low or not expressed, but activation to re-express SEMA7A occurs in these adult tissues to cause pleiotropic effects which increase tumorigenesis.[12][13] Tumor cell growth, EMT, lung metastasis and angiogenesis have been linked to increased Sema7a expression in murine models.[14][15][16] Increased SEMA7A expression correlates with poor prognosis in breast cancer patients.[13] Tumors increase SEMA7A expression in an involuting environment, but knockout of SEMA7a in mouse models undergoing involution decreases lymphangiogenesis.[17]

Genetics

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This protein is known to have eight variants in the extracellular region: seven lie within the Sema domain and one within the PSI domain.[citation needed]

Molecular biology

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This protein forms dimers.[citation needed]

Notes

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This protein acts as a receptor for the malaria parasitePlasmodium falciparum.

See also

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References

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  1. ^abcENSG00000288455 GRCh38: Ensembl release 89: ENSG00000138623, ENSG00000288455Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000038264Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)".
  6. ^"Tissue expression of SEMA7A - Summary - The Human Protein Atlas".www.proteinatlas.org. Retrieved2020-04-14.
  7. ^abMine T, Harada K, Matsumoto T, Yamana H, Shirouzu K, Itoh K, et al. (May 2000). "CDw108 expression during T-cell development".Tissue Antigens.55 (5):429–436.doi:10.1034/j.1399-0039.2000.550505.x.PMID 10885563.
  8. ^Moresco EM, Donaldson S, Williamson A, Koleske AJ (June 2005)."Integrin-mediated dendrite branch maintenance requires Abelson (Abl) family kinases".The Journal of Neuroscience.25 (26):6105–6118.doi:10.1523/JNEUROSCI.1432-05.2005.PMC 6725048.PMID 15987940.
  9. ^Scott GA, McClelland LA, Fricke AF (January 2008)."Semaphorin 7a promotes spreading and dendricity in human melanocytes through beta1-integrins".The Journal of Investigative Dermatology.128 (1):151–161.doi:10.1038/sj.jid.5700974.PMID 17671519.
  10. ^Bao ZZ, Jin Z (August 2006)."Sema3D and Sema7A have distinct expression patterns in chick embryonic development".Developmental Dynamics.235 (8):2282–2289.doi:10.1002/dvdy.20882.PMC 1564195.PMID 16804892.
  11. ^Pasterkamp RJ, Peschon JJ, Spriggs MK, Kolodkin AL (July 2003). "Semaphorin 7A promotes axon outgrowth through integrins and MAPKs".Nature.424 (6947):398–405.Bibcode:2003Natur.424..398J.doi:10.1038/nature01790.PMID 12879062.S2CID 12690989.
  12. ^Moserle L, Casanovas O (March 2012)."Exploiting pleiotropic activities of semaphorins as multi-target therapies for cancer".EMBO Molecular Medicine.4 (3):168–170.doi:10.1002/emmm.201200206.PMC 3376851.PMID 22323445.
  13. ^abBlack SA, Nelson AC, Gurule NJ, Futscher BW, Lyons TR (September 2016)."Semaphorin 7a exerts pleiotropic effects to promote breast tumor progression".Oncogene.35 (39):5170–5178.doi:10.1038/onc.2016.49.PMC 5720143.PMID 27065336.
  14. ^Garcia-Areas R, Libreros S, Amat S, Keating P, Carrio R, Robinson P, et al. (2014)."Semaphorin7A promotes tumor growth and exerts a pro-angiogenic effect in macrophages of mammary tumor-bearing mice".Frontiers in Physiology.5: 17.doi:10.3389/fphys.2014.00017.PMC 3914020.PMID 24550834.
  15. ^Allegra M, Zaragkoulias A, Vorgia E, Ioannou M, Litos G, Beug H, et al. (October 2012). Chernoff J (ed.)."Semaphorin-7a reverses the ERF-induced inhibition of EMT in Ras-dependent mouse mammary epithelial cells".Molecular Biology of the Cell.23 (19):3873–3881.doi:10.1091/mbc.e12-04-0276.PMC 3459863.PMID 22875994.
  16. ^Ringnér M, Fredlund E, Häkkinen J, Borg Å, Staaf J (March 2011). Creighton C (ed.)."GOBO: gene expression-based outcome for breast cancer online".PLOS ONE.6 (3) e17911.Bibcode:2011PLoSO...617911R.doi:10.1371/journal.pone.0017911.PMC 3061871.PMID 21445301.
  17. ^Elder AM, Tamburini BA, Crump LS, Black SA, Wessells VM, Schedin PJ, et al. (November 2018)."Semaphorin 7A Promotes Macrophage-Mediated Lymphatic Remodeling during Postpartum Mammary Gland Involution and in Breast Cancer".Cancer Research.78 (22):6473–6485.doi:10.1158/0008-5472.CAN-18-1642.PMC 6239927.PMID 30254150.

Further reading

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External links

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This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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