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Complement factor I

From Wikipedia, the free encyclopedia

Protein
CFI
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2XRC

Identifiers
AliasesCFI, AHUS3, ARMD13, C3BINA, C3b-INA, FI, IF, KAF, complement factor I
External IDsOMIM:217030;MGI:105937;HomoloGene:171;GeneCards:CFI;OMA:CFI - orthologs
Gene location (Human)
Chromosome 4 (human)
Chr.Chromosome 4 (human)[1]
Chromosome 4 (human)
Genomic location for CFI
Genomic location for CFI
Band4q25Start109,740,694bp[1]
End109,802,179bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for CFI
Genomic location for CFI
Band3 G3|3 59.21 cMStart129,629,533bp[2]
End129,668,981bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • germinal epithelium

  • parietal pleura

  • right lobe of liver

  • gallbladder

  • palpebral conjunctiva

  • visceral pleura

  • kidney tubule

  • human kidney

  • right adrenal cortex

  • caput epididymis
Top expressed in
  • left lobe of liver

  • epithelium of stomach

  • pyloric antrum

  • gallbladder

  • mucous cell of stomach

  • fetal liver hematopoietic progenitor cell

  • migratory enteric neural crest cell

  • human fetus

  • endocardial cushion

  • yolk sac
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3426

12630

Ensembl

ENSG00000205403

ENSMUSG00000058952

UniProt

P05156
Q8WW88

Q61129

RefSeq (mRNA)

NM_000204
NM_001318057
NM_001331035

NM_007686
NM_001329552

RefSeq (protein)
NP_000195
NP_001304986
NP_001317964
NP_001362207
NP_001362208

NP_001362209
NP_001362210
NP_001362211
NP_001362212
NP_001362213
NP_001304986.1

NP_001316481
NP_031712

Location (UCSC)Chr 4: 109.74 – 109.8 MbChr 3: 129.63 – 129.67 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Complement factor I, also known asC3b/C4b inactivator, is aprotein that in humans is encoded by theCFIgene. Complement factor I (factor I) is a protein of thecomplement system, first isolated in 1966 inguinea pigserum,[5] that regulates complement activation by cleaving cell-bound or fluid phase C3b and C4b.[6] It is a solubleglycoprotein that circulates in human blood at an average concentration of 35 μg/mL.[7]

Synthesis

[edit]

Thegene for Factor I in humans is located onchromosome 4.[8] Factor I is synthesized mostly in the liver, but also in monocytes, fibroblasts, keratinocytes, and endothelial cells.[9][10][11] When synthesized, it is a 66kDa polypeptide chain with N-linked glycans at 6 positions.[12] Then, factor I is cleaved byfurin to yield the mature factor I protein, which is adisulfide-linkeddimer of heavy chain (residues 19-335, 51 kDalton) and light chain (residues 340-583, 37 kDalton).[13] Only the mature protein is active.

Structure

[edit]

Factor I is a glycoproteinheterodimer consisting of a disulfide linked heavy chain and light chain.[14]

The factor I heavy chain has fourdomains: an FI membrane attack complex (FIMAC) domain, CD5 domain, and low density lipoprotein receptor 1 and 2 (LDLr1 and LDLr2) domains.[15] the heavy chain plays an inhibitory role in maintaining the enzyme inactive until it meets the complex formed by thesubstrate (either C3b or C4b) and a cofactor protein (Factor H, C4b-binding protein, complement receptor 1, and membrane cofactor protein).[16] Upon binding of the enzyme to the substrate:cofactor complex, the heavy:light chain interface is disrupted, and the enzyme activated by allostery.[16] The LDL-receptor domains contain one Calcium-binding site each.

The factor I light chain contains only theserine protease domain. This domain contains thecatalytic triad His-362, Asp-411, and Ser-507, which is responsible for specific cleavage of C3b and C4b.[15] Conventional protease inhibitors do not completely inactivate Factor I[17] but they can do so if the enzyme is pre-incubated with its substrate: this supports the proposed rearrangement of the molecule upon binding to the substrate.

Both heavy and light chains bearAsn-linkedglycans, on three distinctglycosylation sites each.

Crystal structure the crystal structure of human Factor I has been deposited asPDB:2XRC.

Clinical significance

[edit]

Dysregulated factor I activity has clinical implications. Loss of function mutations in the Complement Factor I gene lead to low levels of factor I which results in increased complement activity. Factor I deficiency in turn leads to low levels ofcomplement component 3 (C3),factor B,factor H andproperdin in blood, due to unregulated activation ofC3 convertase, and to low levels ofIgG, due to loss ofiC3b and C3dg production. In addition to the following diseases, low factor I is associated with recurrent bacterial infections in children.

Age-related macular degeneration

[edit]

Research suggests that mutations in the CFI gene contribute to development ofage-related macular degeneration.[18] This contribution is thought to be due to the dysregulation of the alternative pathway, leading to increased inflammation in the eye.[19]

Atypical hemolytic uremic syndrome

[edit]

Atypical hemolytic uremic syndrome is caused by complement overactivation.[20]Heterozygous mutations in the serine protease domain of the CFI gene account for 5-10% of cases.[20]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000205403Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000058952Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Nelson RA, Jensen J, Gigli I, Tamura N (March 1966). "Methods for the separation, purification and measurement of nine components of hemolytic complement in guinea-pig serum".Immunochemistry.3 (2):111–35.doi:10.1016/0019-2791(66)90292-8.PMID 5960883.
  6. ^Lachmann PJ, Müller-Eberhard HJ (April 1968)."The demonstration in human serum of "conglutinogen-activating factor" and its effect on the third component of complement".Journal of Immunology.100 (4):691–8.doi:10.4049/jimmunol.100.4.691.PMID 5645214.
  7. ^Nilsson SC, Sim RB, Lea SM, Fremeaux-Bacchi V, Blom AM (August 2011)."Complement factor I in health and disease".Molecular Immunology (Submitted manuscript).48 (14):1611–20.doi:10.1016/j.molimm.2011.04.004.PMID 21529951.S2CID 37521895.
  8. ^Goldberger G, Bruns GA, Rits M, Edge MD, Kwiatkowski DJ (July 1987)."Human complement factor I: analysis of cDNA-derived primary structure and assignment of its gene to chromosome 4".The Journal of Biological Chemistry.262 (21):10065–71.doi:10.1016/S0021-9258(18)61076-2.PMID 2956252.
  9. ^Vyse TJ, Morley BJ, Bartok I, Theodoridis EL, Davies KA, Webster AD, Walport MJ (February 1996)."The molecular basis of hereditary complement factor I deficiency".The Journal of Clinical Investigation.97 (4):925–33.doi:10.1172/JCI118515.PMC 507137.PMID 8613545.
  10. ^Julen N, Dauchel H, Lemercier C, Sim RB, Fontaine M, Ripoche J (January 1992). "In vitro biosynthesis of complement factor I by human endothelial cells".European Journal of Immunology.22 (1):213–7.doi:10.1002/eji.1830220131.PMID 1530917.S2CID 30130789.
  11. ^Whaley K (March 1980)."Biosynthesis of the complement components and the regulatory proteins of the alternative complement pathway by human peripheral blood monocytes".The Journal of Experimental Medicine.151 (3):501–16.doi:10.1084/jem.151.3.501.PMC 2185797.PMID 6444659.
  12. ^Tsiftsoglou SA, Arnold JN, Roversi P, Crispin MD, Radcliffe C, Lea SM, Dwek RA, Rudd PM, Sim RB (November 2006). "Human complement factor I glycosylation: structural and functional characterisation of the N-linked oligosaccharides".Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics.1764 (11):1757–66.CiteSeerX 10.1.1.712.1764.doi:10.1016/j.bbapap.2006.09.007.PMID 17055788.
  13. ^"FURIN furin, paired basic amino acid cleaving enzyme [Homo sapiens (human)] - Gene - NCBI".www.ncbi.nlm.nih.gov. Retrieved2018-03-30.
  14. ^"CFI complement factor I [Homo sapiens (human)] - Gene - NCBI".www.ncbi.nlm.nih.gov. Retrieved2018-03-27.
  15. ^abSanchez-Gallego JI, Groeneveld TW, Krentz S, Nilsson SC, Villoutreix BO, Blom AM (April 2012)."Analysis of binding sites on complement factor I using artificial N-linked glycosylation".The Journal of Biological Chemistry.287 (17):13572–83.doi:10.1074/jbc.M111.326298.PMC 3340171.PMID 22393059.
  16. ^abRoversi P, Johnson S, Caesar JJ, McLean F, Leath KJ, Tsiftsoglou SA, Morgan BP, Harris CL, Sim RB, Lea SM (August 2011)."Structural basis for complement factor I control and its disease-associated sequence polymorphisms".Proceedings of the National Academy of Sciences of the United States of America.108 (31):12839–44.Bibcode:2011PNAS..10812839R.doi:10.1073/pnas.1102167108.PMC 3150940.PMID 21768352.
  17. ^Ekdahl KN, Nilsson UR, Nilsson B (June 1990)."Inhibition of factor I by diisopropylfluorophosphate. Evidence of conformational changes in factor I induced by C3b and additional studies on the specificity of factor I".Journal of Immunology.144 (11):4269–74.doi:10.4049/jimmunol.144.11.4269.PMID 2140392.
  18. ^Wang Q, Zhao HS, Li L (2016-02-18)."Association between complement factor I gene polymorphisms and the risk of age-related macular degeneration: a Meta-analysis of literature".International Journal of Ophthalmology.9 (2):298–305.doi:10.18240/ijo.2016.02.23.PMC 4761747.PMID 26949655.
  19. ^Tan PL, Garrett ME, Willer JR, Campochiaro PA, Campochiaro B, Zack DJ, Ashley-Koch AE, Katsanis N (March 2017)."Systematic Functional Testing of Rare Variants: Contributions of CFI to Age-Related Macular Degeneration".Investigative Ophthalmology & Visual Science.58 (3):1570–1576.doi:10.1167/iovs.16-20867.PMC 6022411.PMID 28282489.
  20. ^abKavanagh D, Goodship TH, Richards A (November 2013)."Atypical hemolytic uremic syndrome".Seminars in Nephrology.33 (6):508–30.doi:10.1016/j.semnephrol.2013.08.003.PMC 3863953.PMID 24161037.

Further reading

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External links

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