swaRmverse: Swarm Space Creation
Provides a pipeline for the comparative analysis of collective movement data (e.g. fish schools, bird flocks, baboon troops) by processing 2-dimensional positional data (x,y,t) from GPS trackers or computer vision tracking systems, discretizing events of collective motion, calculating a set of established metrics that characterize each event, and placing the events in a multi-dimensional swarm space constructed from these metrics. The swarm space concept, the metrics and data sets included are described in: Papadopoulou Marina, Furtbauer Ines, O'Bryan Lisa R., Garnier Simon, Georgopoulou Dimitra G., Bracken Anna M., Christensen Charlotte and King Andrew J. (2023) <doi:10.1098/rstb.2022.0068>.
| Version: | 0.1.1 |
| Depends: | R (≥ 3.5) |
| Imports: | parallel,pbapply,Rtsne,trackdf,swaRm,geosphere |
| Suggests: | knitr,rmarkdown,ggplot2,testthat (≥ 3.0.0),covr |
| Published: | 2024-10-10 |
| DOI: | 10.32614/CRAN.package.swaRmverse |
| Author: | Marina Papadopoulou [aut, cre], Simon Garnier [ctb, cph] |
| Maintainer: | Marina Papadopoulou <m.papadopoulou.rug at gmail.com> |
| BugReports: | https://github.com/marinapapa/swaRmverse/issues |
| License: | GPL-3 |
| URL: | https://marinapapa.github.io/swaRmverse/,https://github.com/marinapapa/swaRmverse |
| NeedsCompilation: | no |
| Citation: | swaRmverse citation info |
| Materials: | README,NEWS |
| CRAN checks: | swaRmverse results |
Documentation:
| Reference manual: | swaRmverse.html ,swaRmverse.pdf |
| Vignettes: | 1 - Data Preparation (source,R code) 2 - Data Analysis (source,R code) 3 - The Swarm-Verse (source,R code) |
Downloads:
| Package source: | swaRmverse_0.1.1.tar.gz |
| Windows binaries: | r-devel:swaRmverse_0.1.1.zip, r-release:swaRmverse_0.1.1.zip, r-oldrel:swaRmverse_0.1.1.zip |
| macOS binaries: | r-release (arm64):swaRmverse_0.1.1.tgz, r-oldrel (arm64):swaRmverse_0.1.1.tgz, r-release (x86_64):swaRmverse_0.1.1.tgz, r-oldrel (x86_64):swaRmverse_0.1.1.tgz |
| Old sources: | swaRmverse archive |
Linking:
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