rbioapi: User-Friendly R Interface to Biologic Web Services' API
Currently fully supports Enrichr, JASPAR, miEAA, PANTHER, Reactome, STRING, and UniProt! The goal of rbioapi is to provide a user-friendly and consistent interface to biological databases and services. In a way that insulates the user from the technicalities of using web services API and creates a unified and easy-to-use interface to biological and medical web services. This is an ongoing project; New databases and services will be added periodically. Feel free to suggest any databases or services you often use.
Documentation:
| Reference manual: | rbioapi.html ,rbioapi.pdf |
| Vignettes: | 1: rbioapi: User-Friendly R Interface to Biologic Web Services' API (source,R code)
3.A: Do with rbioapi: Enrichment (Over-Representation) Analysis in R (source,R code)
2.A: Enrichr & rbioapi (source,R code)
2.B: JASPAR & rbioapi (source,R code)
2.C: miEEA & rbioapi (source,R code)
2.D: PANTHER & rbioapi (source,R code)
2.E: Reactome & rbioapi (source,R code)
2.F: STRING & rbioapi (source,R code)
2.G: UniProt & rbioapi (source,R code)
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Downloads:
Reverse dependencies:
Linking:
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