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SIMPLICA: Biclustering via Simplivariate Component Analysis

Identifies constant, additive, multiplicative, and user-defined simplivariate components in numeric data matrices using a genetic algorithm. Supports flexible pattern definitions and provides visualization for general biclustering applications across diverse domains. The method builds on simplivariate models as introduced in Hageman et al. (2008) <doi:10.1371/journal.pone.0003259> and is related to biclustering frameworks as reviewed by Madeira and Oliveira (2004) <doi:10.1109/TCBB.2004.2>.

Version:1.0.0
Depends:R (≥ 2.10)
Imports:GA,ggplot2,ggsci
Published:2025-09-03
DOI:10.32614/CRAN.package.SIMPLICA
Author:Jos Hageman [aut, cre]
Maintainer:Jos Hageman <jos.hageman at wur.nl>
BugReports:https://github.com/joshageman/SIMPLICA/issues
License:GPL-3
URL:https://github.com/joshageman/SIMPLICA
NeedsCompilation:no
CRAN checks:SIMPLICA results

Documentation:

Reference manual:SIMPLICA.html ,SIMPLICA.pdf

Downloads:

Package source: SIMPLICA_1.0.0.tar.gz
Windows binaries: r-devel:SIMPLICA_1.0.0.zip, r-release:SIMPLICA_1.0.0.zip, r-oldrel:SIMPLICA_1.0.0.zip
macOS binaries: r-release (arm64):SIMPLICA_1.0.0.tgz, r-oldrel (arm64):SIMPLICA_1.0.0.tgz, r-release (x86_64):SIMPLICA_1.0.0.tgz, r-oldrel (x86_64):SIMPLICA_1.0.0.tgz

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=SIMPLICAto link to this page.


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