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csmGmm: Conditionally Symmetric Multidimensional Gaussian Mixture Model

Implements the conditionally symmetric multidimensional Gaussian mixture model (csmGmm) for large-scale testing of composite null hypotheses in genetic association applications such as mediation analysis, pleiotropy analysis, and replication analysis. In such analyses, we typically have J sets of K test statistics where K is a small number (e.g. 2 or 3) and J is large (e.g. 1 million). For each one of the J sets, we want to know if we can reject all K individual nulls. Please see the vignette for a quickstart guide. The paper describing these methods is "Testing a Large Number of Composite Null Hypotheses Using Conditionally Symmetric Multidimensional Gaussian Mixtures in Genome-Wide Studies" by Sun R, McCaw Z, & Lin X (Journal of the American Statistical Association 2025, <doi:10.1080/01621459.2024.2422124>).

Version:0.4.0
Imports:dplyr,mvtnorm,rlang,magrittr
Suggests:knitr,rmarkdown
Published:2025-09-16
DOI:10.32614/CRAN.package.csmGmm
Author:Ryan Sun [aut, cre]
Maintainer:Ryan Sun <ryansun.work at gmail.com>
License:GPL-3
NeedsCompilation:no
Materials:README
CRAN checks:csmGmm results

Documentation:

Reference manual:csmGmm.html ,csmGmm.pdf
Vignettes:Tutorial (source,R code)

Downloads:

Package source: csmGmm_0.4.0.tar.gz
Windows binaries: r-devel:csmGmm_0.4.0.zip, r-release:csmGmm_0.4.0.zip, r-oldrel:csmGmm_0.4.0.zip
macOS binaries: r-release (arm64):csmGmm_0.4.0.tgz, r-oldrel (arm64):csmGmm_0.4.0.tgz, r-release (x86_64):csmGmm_0.4.0.tgz, r-oldrel (x86_64):csmGmm_0.4.0.tgz
Old sources: csmGmm archive

Linking:

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