scPipeline: A Wrapper for 'Seurat' and Related R Packages for End-to-EndSingle Cell Analysis
Reports markers list, differentially expressed genes, associated pathways, cell-type annotations, does batch correction and other related single cell analyses all wrapped within 'Seurat'.
| Version: | 0.2.0.0 |
| Imports: | Seurat,batchelor,dplyr,ReactomeGSA,celldex,SingleR,SummarizedExperiment,biomaRt,magrittr,rlang |
| Suggests: | knitr,rmarkdown |
| Published: | 2025-03-07 |
| DOI: | 10.32614/CRAN.package.scPipeline |
| Author: | Viswanadham Sridhara [aut, cre] |
| Maintainer: | Viswanadham Sridhara <Sridhara.Omics at gmail.com> |
| License: | MIT + fileLICENSE |
| NeedsCompilation: | no |
| Materials: | README,NEWS |
| CRAN checks: | scPipeline results |
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