Improved version of 'GRIN' software that streamlines its use in practice to analyze genomic lesion data, accelerate its computing, and expand its analysis capabilities to answer additional scientific questions including a rigorous evaluation of the association of genomic lesions with RNA expression. Pounds, Stan, et al. (2013) <doi:10.1093/bioinformatics/btt372>.
| Version: | 2.0.0 |
| Depends: | R (≥ 4.2.0) |
| Imports: | circlize,data.table,dplyr,forcats,ggplot2, graphics, grDevices, grid,magrittr, stats,stringr,survival,tibble,tidyselect, utils,writexl |
| Suggests: | knitr,rmarkdown,biomaRt,gridGraphics,Gviz,ensembldb,GenomeInfoDb,ComplexHeatmap |
| Published: | 2025-06-17 |
| DOI: | 10.32614/CRAN.package.GRIN2 |
| Author: | Abdelrahman Elsayed [aut, cre, cph], Xueyuan Cao [aut], Lakshmi Anuhya patibandla [aut], Stanley Pounds [aut, cph] |
| Maintainer: | Abdelrahman Elsayed <aelsayed at stjude.org> |
| BugReports: | https://github.com/abdel-elsayed87/GRIN2/issues |
| License: | GPL (≥ 3) |
| URL: | https://github.com/abdel-elsayed87/GRIN2 |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | GRIN2 results |