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UpSetR: A More Scalable Alternative to Venn and Euler Diagrams forVisualizing Intersecting Sets

Creates visualizations of intersecting sets using a novel matrix design, along with visualizations of several common set, element and attribute related tasks (Conway 2017) <doi:10.1093/bioinformatics/btx364>.

Version:	1.4.0
Depends:	R (≥ 3.0)
Imports:	ggplot2,gridExtra,plyr, utils, stats, methods, grDevices,scales
Suggests:	knitr
Published:	2019-05-22
DOI:	10.32614/CRAN.package.UpSetR
Author:	Jake Conway [cre], Nils Gehlenborg [aut]
Maintainer:	Jake Conway <jake_conway at hms.harvard.edu>
BugReports:	http://github.com/hms-dbmi/UpSetR/issues
License:	MIT + fileLICENSE
URL:	http://github.com/hms-dbmi/UpSetR
NeedsCompilation:	no
Materials:	README,NEWS
CRAN checks:	UpSetR results

Documentation:

Reference manual:	UpSetR.html ,UpSetR.pdf
Vignettes:	Attribute Plots (source,R code) Basic Usage (source,R code) Querying the Data (source,R code) Incorporating Set Metadata (source,R code)

Downloads:

Package source:	UpSetR_1.4.0.tar.gz
Windows binaries:	r-devel:UpSetR_1.4.0.zip, r-release:UpSetR_1.4.0.zip, r-oldrel:UpSetR_1.4.0.zip
macOS binaries:	r-release (arm64):UpSetR_1.4.0.tgz, r-oldrel (arm64):UpSetR_1.4.0.tgz, r-release (x86_64):UpSetR_1.4.0.tgz, r-oldrel (x86_64):UpSetR_1.4.0.tgz
Old sources:	UpSetR archive

Reverse dependencies:

Reverse imports:	artMS,ASpli,biblioverlap,bulkAnalyseR,dar,DiscoRhythm,fastml,HiCaptuRe,iCOBRA,ideal,inDAGO,ivygapSE,LymphoSeq,MAGAR,MatrixQCvis,mpwR,MultiRNAflow,naniar,plinkQC,PolySTest,PRONE,PTXQC,RFLOMICS,rimu,seqsetvis,tidypopgen,ViSEAGO
Reverse suggests:	anglemania,Cepo,ChIPpeakAnno,distinct,DuplexDiscovereR,fuseMLR,ggpicrust2,HMP2Data,HoloFoodR,immunarch,mastR,MetaNeighbor,miceFast,MultiAssayExperiment,MungeSumstats,muscat,OmicNavigator,omicsTools,pcutils,SingleCellMultiModal,smartid,StabMap,systemPipeShiny,TFutils

Linking:

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