Extensions to 'ggplot2' respecting the grammar of graphics paradigm. Statistics: locate and tag peaks and valleys; label plot with the equation of a fitted polynomial or other types of models including major axis, quantile and robust and resistant regression. Labels for P-value, R^2 or adjusted R^2 or information criteria for fitted models; parametric and non-parametric correlation; label with ANOVA table for fitted models; label with summary table for fitted models; annotations for multiple comparisons with adjusted P-values. Model fit classes for which suitable methods are provided by package 'broom' and 'broom.mixed' are supported as well as user-defined wrappers on model fit functions. Scales and stats to build volcano and quadrant plots based on outcomes, fold changes, p-values and false discovery rates.
| Version: | 0.6.3 |
| Depends: | R (≥ 4.0.0),ggpp (≥ 0.5.8) |
| Imports: | grid, stats,ggplot2 (≥ 3.5.0),scales (≥ 1.3.0),rlang (≥1.1.3),generics (≥ 0.1.3),MASS (≥ 7.3-60),confintr (≥1.0.2),polynom (≥ 1.4-1),quantreg (≥ 6.0),lmodel2 (≥1.7-4),nlme (≥ 3.1-160),splus2R (≥ 1.3-5),multcomp (≥1.4-25),multcompView (≥ 0.1-10),mixtools (≥ 2.0.0),tibble (≥ 3.2.1),plyr (≥ 1.8.9),dplyr (≥ 1.1.4),tidyr (≥1.3.0),lubridate (≥ 1.9.3),caTools (≥ 1.18.3) |
| Suggests: | knitr (≥ 1.45),rmarkdown (≥ 2.25),ggrepel (≥ 0.9.5),broom (≥ 1.0.3),broom.mixed (≥ 0.2.9.5),robustbase (≥0.99-4-1),gginnards (≥ 0.2.0),ggtext (≥ 0.1.2),testthat,vdiffr |
| Published: | 2025-11-29 |
| DOI: | 10.32614/CRAN.package.ggpmisc |
| Author: | Pedro J. Aphalo [aut, cre], Kamil Slowikowski [ctb], Samer Mouksassi [ctb] |
| Maintainer: | Pedro J. Aphalo <pedro.aphalo at helsinki.fi> |
| BugReports: | https://github.com/aphalo/ggpmisc/issues |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://docs.r4photobiology.info/ggpmisc/,https://github.com/aphalo/ggpmisc |
| NeedsCompilation: | no |
| Materials: | README,NEWS |
| CRAN checks: | ggpmisc results |