Tools for estimating incidence from biomarker data in cross- sectional surveys, and for calibrating tests for recent infection. Implements and extends the method of Kassanjee et al. (2012) <doi:10.1097/EDE.0b013e3182576c07>.
| Version: | 1.0.15 |
| Depends: | R (≥ 3.4.0) |
| Imports: | stats, utils,magrittr,rlang,dplyr,tibble,cubature,tmvtnorm,ggplot2,glm2,plyr,pracma,foreach, parallel,doParallel,binom |
| Suggests: | survey,knitr,rmarkdown |
| Published: | 2019-11-07 |
| DOI: | 10.32614/CRAN.package.inctools |
| Author: | Eduard Grebe [cre, aut], Alex Welte [aut], Avery McIntosh [aut], Petra Bäumler [aut], Reshma Kassanjee [ctb], Hilmarie Brand [ctb], Cari Van Schalkwyk [ctb], Yuruo Li [ctb], Simon Daniel [ctb], Stefano Ongarello [aut], Yusuke Asai [ctb], Jeffrey Eaton [ctb] |
| Maintainer: | Eduard Grebe <Eduard.Grebe at ucsf.edu> |
| BugReports: | https://github.com/SACEMA/inctools/issues |
| License: | GPL-3 |
| URL: | http://www.incidence-estimation.org/page/inctools |
| NeedsCompilation: | no |
| In views: | Epidemiology |
| CRAN checks: | inctools results |
| Reference manual: | inctools.html ,inctools.pdf |
| Vignettes: | Estimating incidence (source,R code) Overview of inctools (source) Survey design (source,R code) Test calibration (source,R code) |
| Package source: | inctools_1.0.15.tar.gz |
| Windows binaries: | r-devel:inctools_1.0.15.zip, r-release:inctools_1.0.15.zip, r-oldrel:inctools_1.0.15.zip |
| macOS binaries: | r-release (arm64):inctools_1.0.15.tgz, r-oldrel (arm64):inctools_1.0.15.tgz, r-release (x86_64):inctools_1.0.15.tgz, r-oldrel (x86_64):inctools_1.0.15.tgz |
| Old sources: | inctools archive |
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