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glyparse 0.5.3

Minor improvements and fixes

• Prepare for release on CRAN.

glyparse 0.5.2

Minor improvements andfixes

• glyaprse now depends on the CRAN version of glyrepr.

glyparse 0.5.1

Minor improvements andfixes

• parse_iupac_extended() andparse_iupac_short() now support generic monosaccharides,e.g. “Hex”, “HexNAc”, “HexN”.

glyparse 0.5.0

New features

• Addparse_linear_code() to parse Linear Codestrings.
• auto_parse() now supports Linear Code strings.

Minor improvements andfixes

• Revise the documentations of all parsers to be more accurate aboutreturn value type.

glyparse 0.4.5

Minor improvements andfixes

• Fix the bug that linkages like “1→3/4” cannot be parsed byparse_iupac_extended().
• Fix the bug that linkages like “b1-a3|a4” cannot be parsed byparse_wurcs().
• Fix the bug that linkages like “a3/4” cannot be parsed byparse_iupac_short().
• Fix the bug that linkages like “3:3o(3|6+1)4d” cannot be parsed byparse_glycoct().

glyparse 0.4.4

Minor improvements and bugfixes

• Update dependencies to depend on release versions of glycoversepackages.

glyparse 0.4.3

Minor improvements andfixes

• Fix bugs introduced by the breaking changes inglyreprv0.7.0.

glyparse 0.4.2

Minor improvements andfixes

• Fix some incorrect structure strings in vignettes.

glyparse 0.4.1

Minor improvements andfixes

• Fix some incorrect structure strings in tests anddocumentations.
• Remove some legacy documentations.

glyparse 0.4.0

Breaking changes

• parse_iupac_condensed() andparse_iupac_short() now require the reducing-endmonosaccharide to have anomer information. For example, “Neu5Ac(a2-” and“Neu5Aca-” are valid, but “Neu5Ac” is not.

glyparse 0.3.1

Minor improvements andfixes

• parse_pglyco_struc() now support “aH” and “pH”monosaccharides.

glyparse 0.3.0

New features

• Addauto_parse() to automatically detect and parsedifferent glycan structure string formats.

Minor improvements andfixes

• Better error messages. Before:

  >parse_iupac_condensed("bad_glycan")

  Error in `purrr::map()` at glyparse/R/struc-parser-wrapper.R:13:3:ℹ In index: 1.Caused by error in `value[[3L]]()`:! Could not parse IUPAC-condensed string: {.val {x}}ℹ Invalid characters or format in IUPAC-condensed stringRun `rlang::last_trace()` to see where the error occurred.

  Now:

  >parse_iupac_condensed("bad_glycan")

  Error in `parse_iupac_condensed()`:! Can't parse: "bad_glycan"Run `rlang::last_trace()` to see where the error occurred.

glyparse 0.2.1

Minor improvements andfixes

• Update README.
• A “Get Started” vignette is added.

glyparse 0.2.0

Major improvements

• Addparse_glycoct() to parse glycans in GlycoCTformat.

glyparse 0.1.2

Minor improvements

• parse_iupac_short(),parse_iupac_extended(),parse_iupac_condensed(),parse_wurcs() nowsupport multiple substituents on the same monosaccharide, to align withthe updates inglyrepr v0.5.0.