Genotyping of triploid individuals from luminescence data (marker probeset A and B). Works also for diploids.Two main functions: Run_Clustering() that regroups individuals with a same genotype based on proximity andRun_Genotyping() that assigns a genotype to each cluster. For Shiny interface use: launch_GenoShiny().
| Version: | 1.1.3 |
| Depends: | R (≥ 3.5.0),shinyBS |
| Imports: | cowplot,doParallel,dplyr,DT,foreach,ggplot2,htmltools, parallel,processx,rlang,Rmixmod,shiny,shinythemes,tidyr |
| Published: | 2025-03-25 |
| DOI: | 10.32614/CRAN.package.GenoTriplo |
| Author: | Julien Roche [aut, cre], Florence Phocas [aut], Mathieu Besson [aut], Pierre Patrice [aut], Marc Vandeputte [aut], François Allal [aut], Pierrick Haffray [aut] |
| Maintainer: | Julien Roche <julien.roche at inrae.fr> |
| License: | GPL-2 |GPL-3 [expanded from: GPL] |
| NeedsCompilation: | no |
| CRAN checks: | GenoTriplo results |