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CIARA: Cluster Independent Algorithm for Rare Cell Types Identification

Identification of markers of rare cell types by looking at genes whose expression is confined in small regions of the expression space <https://github.com/ScialdoneLab>.

Version:0.1.0
Depends:R (≥ 4.0)
Imports:Biobase,ggplot2,ggraph,magrittr
Suggests:circlize,clustree,ComplexHeatmap,plotly,Seurat (≥ 4.0),testthat,knitr,rmarkdown
Published:2022-02-22
DOI:10.32614/CRAN.package.CIARA
Author:Gabriele Lubatti
Maintainer:Gabriele Lubatti <gabriele.lubatti at helmholtz-muenchen.de>
License:Artistic-2.0
NeedsCompilation:no
Materials:README
CRAN checks:CIARA results

Documentation:

Reference manual:CIARA.html ,CIARA.pdf
Vignettes:CIARA (source,R code)

Downloads:

Package source: CIARA_0.1.0.tar.gz
Windows binaries: r-devel:CIARA_0.1.0.zip, r-release:CIARA_0.1.0.zip, r-oldrel:CIARA_0.1.0.zip
macOS binaries: r-release (arm64):CIARA_0.1.0.tgz, r-oldrel (arm64):CIARA_0.1.0.tgz, r-release (x86_64):CIARA_0.1.0.tgz, r-oldrel (x86_64):CIARA_0.1.0.tgz

Reverse dependencies:

Reverse suggests:SCOPRO

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=CIARAto link to this page.


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