tidysq: Tidy Processing and Analysis of Biological Sequences
A tidy approach to analysis of biological sequences. All processing and data-storage functions are heavily optimized to allow the fastest and most efficient data storage.
| Version: | 1.2.3 |
| Depends: | R (≥ 3.0.0) |
| Imports: | checkmate (≥ 1.9.0),cli (≥ 2.0.0),crayon (≥ 1.3.4),dplyr (≥ 1.0.2),pillar (≥ 1.4.2),Rcpp (≥ 1.0.1),tibble (≥2.1.3),vctrs (≥ 0.3.0) |
| LinkingTo: | Rcpp,testthat |
| Suggests: | ape (≥ 5.3),bioseq (≥ 0.1.2),Biostrings (≥ 2.52.0),covr,knitr,lifecycle,purrr,seqinr (≥ 3.4-5),spelling,rmarkdown,testthat (≥ 3.0.0),withr (≥ 2.2.0),rlang,mockr |
| Published: | 2025-01-07 |
| DOI: | 10.32614/CRAN.package.tidysq |
| Author: | Dominik Rafacz [cre, aut], Michal Burdukiewicz [aut], Laura Bakala [aut], Leon Eyrich Jessen [ctb], Stefan Roediger [ctb], Jadwiga Slowik [ctb], Weronika Puchala [ctb], Katarzyna Sidorczuk [ctb], Filip Pietluch [ctb], Jaroslaw Chilimoniuk [ctb] |
| Maintainer: | Dominik Rafacz <dominikrafacz at gmail.com> |
| BugReports: | https://github.com/BioGenies/tidysq/issues |
| License: | GPL-2 |GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://github.com/BioGenies/tidysq |
| NeedsCompilation: | yes |
| SystemRequirements: | GNU make, C++17 |
| Language: | en-US |
| Materials: | README,NEWS |
| CRAN checks: | tidysq results |
Documentation:
| Reference manual: | tidysq.html ,tidysq.pdf |
| Vignettes: | Advanced alphabet techniques (source,R code) Quick Start (source,R code) |
Downloads:
| Package source: | tidysq_1.2.3.tar.gz |
| Windows binaries: | r-devel:tidysq_1.2.3.zip, r-release:tidysq_1.2.3.zip, r-oldrel:tidysq_1.2.3.zip |
| macOS binaries: | r-release (arm64):tidysq_1.2.3.tgz, r-oldrel (arm64):tidysq_1.2.3.tgz, r-release (x86_64):tidysq_1.2.3.tgz, r-oldrel (x86_64):tidysq_1.2.3.tgz |
| Old sources: | tidysq archive |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=tidysqto link to this page.