IDSL.UFA: United Formula Annotation (UFA) for HRMS Data Processing
A pipeline to annotate chromatography peaks from the 'IDSL.IPA' workflow <doi:10.1021/acs.jproteome.2c00120> with molecular formulas of a prioritized chemical space using an isotopic profile matching approach. The 'IDSL.UFA' workflow only requires mass spectrometry level 1 (MS1) data for formula annotation. The 'IDSL.UFA' methods was described in <doi:10.1021/acs.analchem.2c00563> .
| Version: | 2.0 |
| Depends: | R (≥ 4.0) |
| Imports: | IDSL.IPA (≥ 2.7),readxl |
| Suggests: | GA |
| Published: | 2023-05-18 |
| DOI: | 10.32614/CRAN.package.IDSL.UFA |
| Author: | Sadjad Fakouri-Baygi [aut], Dinesh Barupal [cre, aut] |
| Maintainer: | Dinesh Barupal <dinesh.barupal at mssm.edu> |
| BugReports: | https://github.com/idslme/idsl.ufa/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/idslme/idsl.ufa |
| NeedsCompilation: | no |
| Citation: | IDSL.UFA citation info |
| CRAN checks: | IDSL.UFA results |
Documentation:
| Reference manual: | IDSL.UFA.html ,IDSL.UFA.pdf |
Downloads:
| Package source: | IDSL.UFA_2.0.tar.gz |
| Windows binaries: | r-devel:IDSL.UFA_2.0.zip, r-release:IDSL.UFA_2.0.zip, r-oldrel:IDSL.UFA_2.0.zip |
| macOS binaries: | r-release (arm64):IDSL.UFA_2.0.tgz, r-oldrel (arm64):IDSL.UFA_2.0.tgz, r-release (x86_64):IDSL.UFA_2.0.tgz, r-oldrel (x86_64):IDSL.UFA_2.0.tgz |
| Old sources: | IDSL.UFA archive |
Reverse dependencies:
| Reverse imports: | IDSL.UFAx |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=IDSL.UFAto link to this page.