The field of immunology benefits from software that can predict which peptide sequences trigger an immune response. 'NetMHCIIpan' is a such a tool: it predicts the binding strength of a short peptide to a Major Histocompatibility Complex class II (MHC-II) molecule. 'NetMHCIIpan' can be used from a web server at <https://services.healthtech.dtu.dk/services/NetMHCIIpan-3.2/> or from the command-line, using a local installation. This package allows to call 'NetMHCIIpan' from R.
| Version: | 1.3.2 |
| Imports: | devtools,dplyr,rappdirs,readr,seqinr,stringr,testit,tibble |
| Suggests: | knitr,rmarkdown,testthat,spelling |
| Published: | 2023-11-08 |
| DOI: | 10.32614/CRAN.package.netmhc2pan |
| Author: | Richèl J.C. Bilderbeek [aut, cre], Lue Ping Zhao [ctb], Byungkuk Min [ctb] |
| Maintainer: | Richèl J.C. Bilderbeek <richel at richelbilderbeek.nl> |
| BugReports: | https://github.com/richelbilderbeek/netmhc2pan/issues |
| License: | GPL-3 |
| URL: | https://github.com/richelbilderbeek/netmhc2pan/ |
| NeedsCompilation: | no |
| SystemRequirements: | NetMHC2pan(https://services.healthtech.dtu.dk/service.php?NetMHCIIpan-3.2) |
| Language: | en-US |
| CRAN checks: | netmhc2pan results |