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incidence2: Compute, Handle and Plot Incidence of Dated Events

Provides functions and classes to compute, handle and visualise incidence from dated events for a defined time interval. Dates can be provided in various standard formats. The class 'incidence2' is used to store computed incidence and can be easily manipulated, subsetted, and plotted.

Version:2.6.3
Depends:grates (≥ 1.3.0), R (≥ 4.1.0)
Imports:grDevices,data.table (≥ 1.15.0),pillar, utils, stats,tibble,tidyr,dplyr (≥ 1.1.0),tidyselect,rlang,vctrs,ympes (≥ 1.3.0)
Suggests:outbreaks,ggplot2,scales,litedown,testthat (≥ 3.0.0),ciTools,withr
Published:2025-06-04
DOI:10.32614/CRAN.package.incidence2
Author:Tim TaylorORCID iD [aut, cre], Thibaut Jombart [ctb]
Maintainer:Tim Taylor <tim.taylor at hiddenelephants.co.uk>
BugReports:https://github.com/reconverse/incidence2/issues
License:MIT + fileLICENSE
URL:https://www.reconverse.org/incidence2/,https://github.com/reconverse/incidence2
NeedsCompilation:no
Materials:README,NEWS
In views:Epidemiology
CRAN checks:incidence2 results

Documentation:

Reference manual:incidence2.html ,incidence2.pdf
Vignettes:An introduction to incidence2 (source,R code)

Downloads:

Package source: incidence2_2.6.3.tar.gz
Windows binaries: r-devel:incidence2_2.6.3.zip, r-release:incidence2_2.6.3.zip, r-oldrel:incidence2_2.6.3.zip
macOS binaries: r-release (arm64):incidence2_2.6.3.tgz, r-oldrel (arm64):incidence2_2.6.3.tgz, r-release (x86_64):incidence2_2.6.3.tgz, r-oldrel (x86_64):incidence2_2.6.3.tgz
Old sources: incidence2 archive

Reverse dependencies:

Reverse suggests:cfr,o2ools,simulist

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=incidence2to link to this page.


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