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MicroMoB: Discrete Time Simulation of Mosquito-Borne Pathogen Transmission

Provides a framework based on S3 dispatch for constructing models of mosquito-borne pathogen transmission which are constructed from submodels of various components (i.e. immature and adult mosquitoes, human populations). A consistent mathematical expression for the distribution of bites on hosts means that different models (stochastic, deterministic, etc.) can be coherently incorporated and updated over a discrete time step.

Version:0.1.2
Imports:abind,jsonlite
Suggests:knitr,rmarkdown,testthat (≥ 3.0.0),ggplot2,data.table,callr,httr,readr,withr,plumber
Published:2023-01-17
DOI:10.32614/CRAN.package.MicroMoB
Author:Sean L. WuORCID iD [aut, cre], David L. SmithORCID iD [aut], Sophie Libkind [ctb]
Maintainer:Sean L. Wu <slwood89 at gmail.com>
BugReports:https://github.com/dd-harp/MicroMoB/issues
License:MIT + fileLICENSE
URL:https://dd-harp.github.io/MicroMoB/,https://github.com/dd-harp/MicroMoB
NeedsCompilation:yes
Materials:README,NEWS
CRAN checks:MicroMoB results

Documentation:

Reference manual:MicroMoB.html ,MicroMoB.pdf
Vignettes:Advanced topics (source,R code)
Beverton-Holt aquatic model (source,R code)
Simple behavioral state mosquito model (source,R code)
Contributing (source,R code)
Queueing model for human superinfection (source,R code)
Micro-MoB (Microsimulation for mosquito-borne pathogens) (source,R code)
Ross-Macdonald mosquito model (source,R code)
Ross-Macdonald transmission model (source,R code)
Blood feeding (source,R code)

Downloads:

Package source: MicroMoB_0.1.2.tar.gz
Windows binaries: r-devel:MicroMoB_0.1.2.zip, r-release:MicroMoB_0.1.2.zip, r-oldrel:MicroMoB_0.1.2.zip
macOS binaries: r-release (arm64):MicroMoB_0.1.2.tgz, r-oldrel (arm64):MicroMoB_0.1.2.tgz, r-release (x86_64):MicroMoB_0.1.2.tgz, r-oldrel (x86_64):MicroMoB_0.1.2.tgz
Old sources: MicroMoB archive

Linking:

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