biclust: BiCluster Algorithms
The main function biclust() provides several algorithms to find biclusters in two-dimensional data: Cheng and Church (2000, ISBN:1-57735-115-0), spectral (2003) <doi:10.1101/gr.648603>, plaid model (2005) <doi:10.1016/j.csda.2004.02.003>, xmotifs (2003) <doi:10.1142/9789812776303_0008> and bimax (2006) <doi:10.1093/bioinformatics/btl060>. In addition, the package provides methods for data preprocessing (normalization and discretisation), visualisation, and validation of bicluster solutions.
| Version: | 2.0.3.1 |
| Depends: | R (≥ 2.10),MASS, grid,colorspace,lattice |
| Imports: | methods,flexclust,additivityTests,tidyr,ggplot2 |
| Suggests: | isa2 |
| Published: | 2023-05-19 |
| DOI: | 10.32614/CRAN.package.biclust |
| Author: | Sebastian Kaiser, Rodrigo Santamaria, Tatsiana Khamiakova, Martin Sill, Roberto Theron, Luis Quintales, Friedrich Leisch, Ewoud De Troyer and Sami Leon. |
| Maintainer: | Sebastian Kaiser <dr.sebastian.kaiser at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| Materials: | NEWS |
| In views: | Cluster |
| CRAN checks: | biclust results[issues need fixing before 2025-12-19] |
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