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OncoSubtype: Predict Cancer Subtypes Based on TCGA Data using MachineLearning Method

Provide functionality for cancer subtyping using nearest centroids or machine learning methods based on TCGA data.

Version:1.0.0
Depends:SummarizedExperiment, R (≥ 3.63)
Imports:caret,randomForest, methods,e1071,pheatmap,tibble,dplyr,limma,rlang,Rdpack
Suggests:knitr,rmarkdown,testthat (≥ 3.0.0)
Published:2024-03-22
DOI:10.32614/CRAN.package.OncoSubtype
Author:Dadong Zhang
Maintainer:Dadong Zhang <dadong.zhang.shared at gmail.com>
BugReports:https://github.com/DadongZ/OncoSubtype/issues
License:GPL-3
URL:https://github.com/DadongZ/OncoSubtype
NeedsCompilation:no
Materials:README
CRAN checks:OncoSubtype results

Documentation:

Reference manual:OncoSubtype.html ,OncoSubtype.pdf
Vignettes:OncoSubtype (source,R code)

Downloads:

Package source: OncoSubtype_1.0.0.tar.gz
Windows binaries: r-devel:OncoSubtype_1.0.0.zip, r-release:OncoSubtype_1.0.0.zip, r-oldrel:OncoSubtype_1.0.0.zip
macOS binaries: r-release (arm64):OncoSubtype_1.0.0.tgz, r-oldrel (arm64):OncoSubtype_1.0.0.tgz, r-release (x86_64):OncoSubtype_1.0.0.tgz, r-oldrel (x86_64):OncoSubtype_1.0.0.tgz

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=OncoSubtypeto link to this page.


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