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OpenSpecy 1.5.0
Major
- Update to vignettes for new functionality.
- Improved plots
- Improved tests for Open Specy format.
- Improved reading of csv files.
- Improved reading of spa files.
- Extended options for library version downloads.
- Simpler function calling
- Extended baseline fitting options.
OpenSpecy 1.3.0
Major
- added 2 new libraries a nobaseline and derivative version of medioidand model
- Created new function for spatial smooth without reading envifiles
- Allow adj_intens to work on vectors or Open Specy objects
Minor
- fixed bug with mac reading libraries
OpenSpecy 1.2.0
Potentially Breaking
- Removed share data options in all functions. They just weren’tuseful to users at all and were more of an administrative thing. Keepingthem forced us to be incompatible with webR.
Major
- added support for siMPle files.
- added support for xyz files.
- added support for img files.
- improved interactive plot popups.
- changed how libraries are downloaded to avoid osfr pacakage.
- increased support for options when collapsing maps.
- avoid forcing min-max relative plots in interactive mode.
- create static map option.
OpenSpecy 1.1.0
Minor Improvements
OpenSpecy 1.0.9
Minor Improvements
- more closing and flexibility options
OpenSpecy 1.0.8
Minor Improvements
- updated
manage_na,spec_res,read_any for easier flow with the app
OpenSpecy 1.0.7
Minor Improvements
- Modified
manage_na.R - Added to NAMESPACE
OpenSpecy 1.0.6
Minor Improvements
- Add attributes to
OpenSpecy objects - More flexible
sig_noise() - Simpler matching
OpenSpecy 1.0.5
Minor Improvements
Bug Fixes
- Flip xy coordinates in ENVI files
OpenSpecy 1.0.4
Minor Improvements
- More contributors
showlegend argument for interactive plots
Bug Fixes
- Fixes a fatal error in
match_spec() probably causingincorrect identifications
OpenSpecy 1.0.3
Minor Improvements
- Simplify
check_OpenSpecy() - Improve unit tests
- Improve interactive plots
OpenSpecy 1.0.2
Bug Fixes
- Set data.table threads to 2 for (CRAN) checks
OpenSpecy 1.0.1
Bug Fixes
- Fixed spelling mistakes
- Reduced example and test run times for CRAN
OpenSpecy 1.0.0
New Features
- Complete package, app, and SOP overhaul!
- The Shiny app has been outsourced to an own GitHub repository:https://github.com/wincowgerDEV/OpenSpecy-shiny
- Spectra are now stored in dedicated
OpenSpecy objects,which can be managed with a set of new functions includingc_spec() for concatenating spectra or converting them backto tables - Various functions have been renamed and improved, for instance, tofacilitate reading (and writing) spectral files
- New functions include
def_features() to identifymicroplastics in spectral maps andai_classify() to use AIfor matching/identifying spectra
Minor Improvements
- Added pkgdown documentation
- Added code coverage tests
OpenSpecy 0.9.5
Bug Fixes
- Fixed outdated links and redirects
OpenSpecy 0.9.4
Minor Improvements
- UI improvements
- Gitter support
Bug Fixes
- Fixed invalid regex failing CRAN checks
OpenSpecy 0.9.3
Minor Improvements
- Better error handling for .csv formats
- Add funders and goals
- Updated package citation
- CI testing for Mac
Bug Fixes
- Fixed testthat routines occasionally failing CRAN checks
OpenSpecy 0.9.2
New Features
- Manual baseline corrections
- Citable technical note
Minor Improvements
- More generic .spa file reading
- Added funding
Bug Fixes
OpenSpecy 0.9.1
Bug Fixes
- Checks fail gracefully if api.osf.io is not reachable
- Adjust UI selectors to comply with inverse axis and not exceedranges
OpenSpecy 0.9.0
New Features
- UI overhaul
- Give more control to the user when starting via
run_app()
Minor Improvements
- Reverse spectral axes to comply with most wavenumber scales
- Let users select metadata license
- Improved data sharing and logging capabilities
- Google Analytics removed
Bug Fixes
- Use tempdir for unit tests and examples
OpenSpecy 0.8.2
Minor Improvements
- Compliance with CRAN style guide
- More references with DOIs
- Better error/warning messages during Shiny file input
Bug Fixes
- Fixed bug with Shiny reactive values
OpenSpecy 0.8.1
Bug Fixes
OpenSpecy 0.8.0
New Features
- Use external Open Specy libraries from OSF
read_asp() for reading Agilent .asp files- GUI overhaul
- Comprehensive package vignette and function documentation
- Unit testing for main functions
Minor Improvements
- Better error handling
- Stripped down dependencies
OpenSpecy 0.7.0
- Transferred code base from openspecy.org to this R package
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