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PEIMAN2: Post-Translational Modification Enrichment, Integration, andMatching Analysis

Functions and mined database from 'UniProt' focusing on post-translational modifications to do single enrichment analysis (SEA) and protein set enrichment analysis (PSEA). Payman Nickchi, Uladzislau Vadadokhau, Mehdi Mirzaie, Marc Baumann, Amir Ata Saei, Mohieddin Jafari (2025) <doi:10.1002/pmic.202400238>.

Version:1.0.1
Depends:R (≥ 2.10)
Imports:ggplot2,dplyr,glue,lifecycle,purrr,rlang,stringr, graphics,forcats, stats,magrittr
Suggests:knitr,rmarkdown,testthat (≥ 3.0.0)
Published:2025-05-31
DOI:10.32614/CRAN.package.PEIMAN2
Author:Mohieddin Jafari [aut], Payman Nickchi [aut, cre]
Maintainer:Payman Nickchi <payman.nickchi at gmail.com>
License:GPL (≥ 3)
NeedsCompilation:no
Materials:README
CRAN checks:PEIMAN2 results

Documentation:

Reference manual:PEIMAN2.html ,PEIMAN2.pdf
Vignettes:PEIMAN2-vignette (source,R code)

Downloads:

Package source: PEIMAN2_1.0.1.tar.gz
Windows binaries: r-devel:PEIMAN2_1.0.1.zip, r-release:PEIMAN2_1.0.1.zip, r-oldrel:PEIMAN2_1.0.1.zip
macOS binaries: r-release (arm64):PEIMAN2_1.0.1.tgz, r-oldrel (arm64):PEIMAN2_1.0.1.tgz, r-release (x86_64):PEIMAN2_1.0.1.tgz, r-oldrel (x86_64):PEIMAN2_1.0.1.tgz
Old sources: PEIMAN2 archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=PEIMAN2to link to this page.


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