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threeBrain: Your Advanced 3D Brain Visualization

A fast, interactive cross-platform, and easy to share 'WebGL'-based 3D brain viewer that visualizes 'FreeSurfer' and/or 'AFNI/SUMA' surfaces. The viewer widget can be either standalone or embedded into 'R-shiny' applications. The standalone version only require a web browser with 'WebGL2' support (for example, 'Chrome', 'Firefox', 'Safari'), and can be inserted into any websites. The 'R-shiny' support allows the 3D viewer to be dynamically generated from reactive user inputs. Please check the publication by Wang, Magnotti, Zhang, and Beauchamp (2023, <doi:10.1523/ENEURO.0328-23.2023>) for electrode localization. This viewer has been fully adopted by 'RAVE' <https://openwetware.org/wiki/RAVE>, an interactive toolbox to analyze 'iEEG' data by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>). Please check 'citation("threeBrain")' for details.

Version:1.2.0
Imports:utils, grDevices, graphics,dipsaus,xml2,servr,png,knitr,shiny (≥ 1.2.0),digest (≥ 0.6.22),freesurferformats (≥0.1.7),jsonlite (≥ 1.5),stringr (≥ 1.3.1),htmlwidgets (≥1.3),R6 (≥ 2.3.0),gifti (≥ 0.7.5),oro.nifti (≥ 0.9.1)
Suggests:rmarkdown,DT,ravetools,htmltools
Published:2024-11-07
DOI:10.32614/CRAN.package.threeBrain
Author:Zhengjia Wang [aut, cre, cph], John Magnotti [ctb, res], Xiang Zhang [ctb, res], Brian Metzger [res], Elizabeth Nesbitt [res], Meng Li [ths], Michael Beauchamp [ths, ctb, dtc]
Maintainer:Zhengjia Wang <dipterix.wang at gmail.com>
BugReports:https://github.com/dipterix/threeBrain/issues
License:MPL-2.0
URL:https://dipterix.org/threeBrain/,https://github.com/dipterix/threeBrain
NeedsCompilation:no
Language:en-US
Citation:threeBrain citation info
Materials:NEWS
In views:MedicalImaging
CRAN checks:threeBrain results

Documentation:

Reference manual:threeBrain.html ,threeBrain.pdf
Vignettes:Getting Started (source,R code)
Data Visualization (Electrodes) (source,R code)

Downloads:

Package source: threeBrain_1.2.0.tar.gz
Windows binaries: r-devel:threeBrain_1.2.0.zip, r-release:threeBrain_1.2.0.zip, r-oldrel:threeBrain_1.2.0.zip
macOS binaries: r-release (arm64):threeBrain_1.2.0.tgz, r-oldrel (arm64):threeBrain_1.2.0.tgz, r-release (x86_64):threeBrain_1.2.0.tgz, r-oldrel (x86_64):threeBrain_1.2.0.tgz
Old sources: threeBrain archive

Reverse dependencies:

Reverse imports:ravecore
Reverse suggests:ravepipeline

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=threeBrainto link to this page.


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