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epicontacts: Handling, Visualisation and Analysis of Epidemiological Contacts

A collection of tools for representing epidemiological contact data, composed of case line lists and contacts between cases. Also contains procedures for data handling, interactive graphics, and statistics.

Version:1.1.4
Imports:grDevices,dplyr,igraph,visNetwork,threejs, methods
Suggests:outbreaks,testthat,covr,shiny,readr,knitr,rmarkdown
Published:2024-04-30
DOI:10.32614/CRAN.package.epicontacts
Author:Finlay Campbell [aut, cre], Thibaut Jombart [aut], Nistara Randhawa [aut], Bertrand Sudre [aut], VP Nagraj [aut], Thomas Crellen [aut], Zhian N. Kamvar [aut]
Maintainer:Finlay Campbell <finlaycampbell93 at gmail.com>
BugReports:https://github.com/reconhub/epicontacts/issues
License:GPL-2 |GPL-3 [expanded from: GPL (≥ 2)]
URL:https://www.repidemicsconsortium.org/epicontacts/
NeedsCompilation:no
Citation:epicontacts citation info
Materials:NEWS
In views:Epidemiology
CRAN checks:epicontacts results

Documentation:

Reference manual:epicontacts.html ,epicontacts.pdf
Vignettes:epicontacts overview (source,R code)
epicontacts class (source,R code)

Downloads:

Package source: epicontacts_1.1.4.tar.gz
Windows binaries: r-devel:epicontacts_1.1.4.zip, r-release:epicontacts_1.1.4.zip, r-oldrel:epicontacts_1.1.4.zip
macOS binaries: r-release (arm64):epicontacts_1.1.4.tgz, r-oldrel (arm64):epicontacts_1.1.4.tgz, r-release (x86_64):epicontacts_1.1.4.tgz, r-oldrel (x86_64):epicontacts_1.1.4.tgz
Old sources: epicontacts archive

Reverse dependencies:

Reverse imports:doublIn
Reverse suggests:epichains,linktree,o2ools,outbreaker2,simulist

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=epicontactsto link to this page.


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