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MCL: Markov Cluster Algorithm

Contains the Markov cluster algorithm (MCL) for identifying clusters in networks and graphs. The algorithm simulates random walks on a (n x n) matrix as the adjacency matrix of a graph. It alternates an expansion step and an inflation step until an equilibrium state is reached.

Version:1.0
Depends:R (≥ 2.10.0)
Imports:expm
Published:2015-03-11
DOI:10.32614/CRAN.package.MCL
Author:Martin L. Jäger
Maintainer:Ronja Foraita <foraita at bips.uni-bremen.de>
License:GPL-2 |GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation:no
CRAN checks:MCL results

Documentation:

Reference manual:MCL.html ,MCL.pdf

Downloads:

Package source: MCL_1.0.tar.gz
Windows binaries: r-devel:MCL_1.0.zip, r-release:MCL_1.0.zip, r-oldrel:MCL_1.0.zip
macOS binaries: r-release (arm64):MCL_1.0.tgz, r-oldrel (arm64):MCL_1.0.tgz, r-release (x86_64):MCL_1.0.tgz, r-oldrel (x86_64):MCL_1.0.tgz

Reverse dependencies:

Reverse imports:mina,miRSM,miRspongeR,RITAN
Reverse suggests:FCPS,simplifyEnrichment

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=MCLto link to this page.


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