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SMAHP: Survival Mediation Analysis of High-Dimensional ProteogenomicData

SMAHP (pronounced as SOO-MAP) is a novel multi-omics framework for causal mediation analysis of high-dimensional proteogenomic data with survival outcomes. The full methodological details can be found in our recent preprint by Ahn S et al. (2025) <doi:10.48550/arXiv.2503.08606>.

Version:0.0.5
Depends:R (≥ 3.5.0)
Imports:data.table,fdrtool,ncvreg,penAFT,survival, stats,glmnet
Suggests:knitr,rmarkdown,testthat (≥ 3.0.0)
Published:2025-03-24
DOI:10.32614/CRAN.package.SMAHP
Author:Seungjun AhnORCID iD [aut], Weijia FuORCID iD [cre, aut], Zhigang Li [ctb]
Maintainer:Weijia Fu <weijia.fu at mountsinai.org>
License:GPL-3
NeedsCompilation:no
Language:en-US
CRAN checks:SMAHP results

Documentation:

Reference manual:SMAHP.html ,SMAHP.pdf
Vignettes:SMAHP (source,R code)

Downloads:

Package source: SMAHP_0.0.5.tar.gz
Windows binaries: r-devel:SMAHP_0.0.5.zip, r-release:SMAHP_0.0.5.zip, r-oldrel:SMAHP_0.0.5.zip
macOS binaries: r-release (arm64):SMAHP_0.0.5.tgz, r-oldrel (arm64):SMAHP_0.0.5.tgz, r-release (x86_64):SMAHP_0.0.5.tgz, r-oldrel (x86_64):SMAHP_0.0.5.tgz

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=SMAHPto link to this page.


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