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BinaryDosage: Creates, Merges, and Reads Binary Dosage Files

Tools to create binary dosage from either VCF or GEN files, merge binary dosage files, and read binary dosage files.

Version:1.0.0
Imports:Rcpp,digest,prodlim
LinkingTo:Rcpp
Suggests:knitr,rmarkdown,testthat (≥ 2.1.0),covr
Published:2020-01-13
DOI:10.32614/CRAN.package.BinaryDosage
Author:John Morrison [aut, cre], NIEHS [fnd] (P01 CA196559), NIEHS [fnd] (R01 CA201407), NIEHS [fnd] (P30 ES007048), NIEHS [fnd] (P01 HL115606)
Maintainer:John Morrison <jmorr at usc.edu>
License:GPL-3
NeedsCompilation:yes
Materials:README,NEWS
CRAN checks:BinaryDosage results[issues need fixing before 2025-12-18]

Documentation:

Reference manual:BinaryDosage.html ,BinaryDosage.pdf
Vignettes:Binary Dosage Formats (source,R code)
Genetic File Information (source,R code)
Merging Files (source,R code)
Estimating Imputed R-squares (source,R code)
Using Binary Dosage files (source,R code)
Using GEN Files (source,R code)
Using VCF Files (source,R code)

Downloads:

Package source: BinaryDosage_1.0.0.tar.gz
Windows binaries: r-devel:BinaryDosage_1.0.0.zip, r-release:BinaryDosage_1.0.0.zip, r-oldrel:BinaryDosage_1.0.0.zip
macOS binaries: r-release (arm64):BinaryDosage_1.0.0.tgz, r-oldrel (arm64):BinaryDosage_1.0.0.tgz, r-release (x86_64):BinaryDosage_1.0.0.tgz, r-oldrel (x86_64):BinaryDosage_1.0.0.tgz

Reverse dependencies:

Reverse suggests:GxEScanR

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=BinaryDosageto link to this page.

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