A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<https://www.cog-genomics.org/plink2>), the whole genome association analysis toolset, without loading the entire file into memory.
| Version: | 2.0.4 |
| Depends: | R (≥ 3.4.0) |
| Imports: | methods,crochet (≥ 2.3.0) |
| Suggests: | data.table,LinkedMatrix,tinytest |
| Published: | 2024-09-06 |
| DOI: | 10.32614/CRAN.package.BEDMatrix |
| Author: | Alexander Grueneberg [aut, cre], Gustavo de los Campos [ctb] |
| Maintainer: | Alexander Grueneberg <cran at agrueneberg.info> |
| BugReports: | https://github.com/QuantGen/BEDMatrix/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/QuantGen/BEDMatrix |
| NeedsCompilation: | yes |
| Citation: | BEDMatrix citation info |
| Materials: | README,NEWS |
| CRAN checks: | BEDMatrix results |
| Reference manual: | BEDMatrix.html ,BEDMatrix.pdf |
| Package source: | BEDMatrix_2.0.4.tar.gz |
| Windows binaries: | r-devel:BEDMatrix_2.0.4.zip, r-release:BEDMatrix_2.0.4.zip, r-oldrel:BEDMatrix_2.0.4.zip |
| macOS binaries: | r-release (arm64):BEDMatrix_2.0.4.tgz, r-oldrel (arm64):BEDMatrix_2.0.4.tgz, r-release (x86_64):BEDMatrix_2.0.4.tgz, r-oldrel (x86_64):BEDMatrix_2.0.4.tgz |
| Old sources: | BEDMatrix archive |
| Reverse depends: | BGData,EBPRS |
| Reverse imports: | CoxMK,hirisplexr,jackstraw,mrMLM,phers |
| Reverse suggests: | gcatest,genio,groupedSurv,lfa,popkin,simtrait,symDMatrix |
Please use the canonical formhttps://CRAN.R-project.org/package=BEDMatrixto link to this page.