A population genetic simulator, which is able to generate synthetic datasets for single-nucleotide polymorphisms (SNP) for multiple populations. The genetic distances among populations can be set according to the Fixation Index (Fst) as explained in Balding and Nichols (1995) <doi:10.1007/BF01441146>. This tool is able to simulate outlying individuals and missing SNPs can be specified. For Genome-wide association study (GWAS), disease status can be set in desired level according risk ratio.
| Version: | 1.1.2 |
| Depends: | R (≥ 3.2.4) |
| Imports: | KRIS (≥ 1.1.1),rARPACK, grDevices, stats, utils |
| Suggests: | testthat |
| Published: | 2021-01-25 |
| DOI: | 10.32614/CRAN.package.FILEST |
| Author: | Kridsadakorn Chaichoompu [aut, cre], Kristel Van Steen [aut], Fentaw Abegaz [aut] |
| Maintainer: | Kridsadakorn Chaichoompu <kridsadakorn at biostatgen.org> |
| BugReports: | https://gitlab.com/kris.ccp/filest/-/issues |
| License: | MIT + fileLICENSE |
| URL: | https://gitlab.com/kris.ccp/filest |
| NeedsCompilation: | no |
| Citation: | FILEST citation info |
| Materials: | README,NEWS |
| In views: | MissingData |
| CRAN checks: | FILEST results |
| Reference manual: | FILEST.html ,FILEST.pdf |
| Package source: | FILEST_1.1.2.tar.gz |
| Windows binaries: | r-devel:FILEST_1.1.2.zip, r-release:FILEST_1.1.2.zip, r-oldrel:FILEST_1.1.2.zip |
| macOS binaries: | r-release (arm64):FILEST_1.1.2.tgz, r-oldrel (arm64):FILEST_1.1.2.tgz, r-release (x86_64):FILEST_1.1.2.tgz, r-oldrel (x86_64):FILEST_1.1.2.tgz |
| Old sources: | FILEST archive |
Please use the canonical formhttps://CRAN.R-project.org/package=FILESTto link to this page.