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nparACT: Non-Parametric Measures of Actigraphy Data

Computes interdaily stability (IS), intradaily variability (IV) & the relative amplitude (RA) from actigraphy data as described in Blume et al. (2016) <doi:10.1016/j.mex.2016.05.006> and van Someren et al. (1999) <doi:10.3109/07420529908998724>. Additionally, it also computes L5 (i.e. the 5 hours with lowest average actigraphy amplitude) and M10 (the 10 hours with highest average amplitude) as well as the respective start times. The flex versions will also compute the L-value for a user-defined number of minutes. IS describes the strength of coupling of a rhythm to supposedly stable zeitgebers. It varies between 0 (Gaussian Noise) and 1 for perfect IS. IV describes the fragmentation of a rhythm, i.e. the frequency and extent of transitions between rest and activity. It is near 0 for a perfect sine wave, about 2 for Gaussian noise and may be even higher when a definite ultradian period of about 2 hrs is present. RA is the relative amplitude of a rhythm. Note that to obtain reliable results, actigraphy data should cover a reasonable number of days.

Version:0.9.1
Depends:R (≥ 3.5)
Imports:ggplot2, grid,stringr,zoo, tools
Suggests:knitr,rmarkdown,roxygen2
Published:2025-12-16
DOI:10.32614/CRAN.package.nparACT
Author:Christine BlumeORCID iD [aut, cre]
Maintainer:Christine Blume <christine.blume at unibas.ch>
License:GPL-3
NeedsCompilation:no
Language:en-GB
Citation:nparACT citation info
Materials:README,NEWS
CRAN checks:nparACT results

Documentation:

Reference manual:nparACT.html ,nparACT.pdf
Vignettes:Introduction to the nparACT package (source,R code)

Downloads:

Package source: nparACT_0.9.1.tar.gz
Windows binaries: r-devel:nparACT_0.9.0.zip, r-release:nparACT_0.9.0.zip, r-oldrel:nparACT_0.9.0.zip
macOS binaries: r-release (arm64):nparACT_0.9.1.tgz, r-oldrel (arm64):nparACT_0.9.1.tgz, r-release (x86_64):nparACT_0.9.1.tgz, r-oldrel (x86_64):nparACT_0.9.1.tgz
Old sources: nparACT archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=nparACTto link to this page.


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