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hidecan: Create HIDECAN Plots for Visualising Genome-Wide AssociationStudies and Differential Expression Results

Generates HIDECAN plots that summarise and combine the results of genome-wide association studies (GWAS) and transcriptomics differential expression analyses (DE), along with manually curated candidate genes of interest. The HIDECAN plot is presented in Angelin-Bonnet et al. (2023) (currently in review).

Version:1.1.0
Depends:R (≥ 3.5.0)
Imports:dplyr,ggnewscale,ggplot2,ggrepel,purrr,shiny,tibble,tidyr,viridis,vroom
Suggests:knitr,rmarkdown,stringr,testthat (≥ 3.0.0)
Published:2023-02-10
DOI:10.32614/CRAN.package.hidecan
Author:Olivia Angelin-BonnetORCID iD [aut, cre]
Maintainer:Olivia Angelin-Bonnet <olivia.angelin-bonnet at plantandfood.co.nz>
BugReports:https://github.com/PlantandFoodResearch/hidecan/issues
License:MIT + fileLICENSE
URL:https://plantandfoodresearch.github.io/hidecan/,https://github.com/PlantandFoodResearch/hidecan
NeedsCompilation:no
Language:en-GB
Materials:README,NEWS
CRAN checks:hidecan results

Documentation:

Reference manual:hidecan.html ,hidecan.pdf
Vignettes:hidecan-step-by-step (source,R code)
hidecan (source,R code)

Downloads:

Package source: hidecan_1.1.0.tar.gz
Windows binaries: r-devel:hidecan_1.1.0.zip, r-release:hidecan_1.1.0.zip, r-oldrel:hidecan_1.1.0.zip
macOS binaries: r-release (arm64):hidecan_1.1.0.tgz, r-oldrel (arm64):hidecan_1.1.0.tgz, r-release (x86_64):hidecan_1.1.0.tgz, r-oldrel (x86_64):hidecan_1.1.0.tgz

Reverse dependencies:

Reverse imports:viewpoly

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=hidecanto link to this page.


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