Creates 'graphs' of species associations (interactions) and ordination biplots from co-occurrence data by fitting discrete gaussian copula graphical models. Methods described in Popovic, GC., Hui, FKC., Warton, DI., (2018) <doi:10.1016/j.jmva.2017.12.002>.
| Version: | 1.0.6 |
| Depends: | R (≥ 3.5.0),mvabund (≥ 4.2) |
| Imports: | glasso,plyr,sna,MASS,tweedie,igraph,betareg,doParallel,mgcv,glm2,ordinal, compiler,foreach, stats |
| Suggests: | knitr,rmarkdown,tidyr,ggplot2,RColorBrewer,ggraph,labdsv,tidygraph, grDevices |
| Published: | 2025-12-04 |
| DOI: | 10.32614/CRAN.package.ecoCopula |
| Author: | Gordana Popovic [aut], David Warton [ctb, cre], Francis K.C. Hui [ctb], Michelle Lim [ctb] |
| Maintainer: | David Warton <david.warton at unsw.edu.au> |
| License: | LGPL-2.1 |LGPL-3 [expanded from: LGPL (≥ 2.1)] |
| URL: | https://eco-stats.github.io/ecoCopula/ |
| NeedsCompilation: | no |
| Citation: | ecoCopula citation info |
| Materials: | README,NEWS |
| In views: | Environmetrics |
| CRAN checks: | ecoCopula results |