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GESE: Gene-Based Segregation Test

Implements the gene-based segregation test(GESE) and the weighted GESE test for identifying genes with causal variants of large effects for family-based sequencing data. The methods are described in Qiao, D. Lange, C., Laird, N.M., Won, S., Hersh, C.P., et al. (2017). <doi:10.1002/gepi.22037>. Gene-based segregation method for identifying rare variants for family-based sequencing studies. Genet Epidemiol 41(4):309-319. More details can be found at <http://scholar.harvard.edu/dqiao/gese>.

Version:2.0.1
Depends:kinship2
Suggests:knitr,rmarkdown
Published:2017-05-18
DOI:10.32614/CRAN.package.GESE
Author:Dandi Qiao, Michael H. Cho
Maintainer:Dandi Qiao <redaq at channing.harvard.edu>
License:GPL-2
NeedsCompilation:yes
CRAN checks:GESE results

Documentation:

Reference manual:GESE.html ,GESE.pdf
Vignettes:An R package for Gene-based Segregation test (GESE) (source,R code)

Downloads:

Package source: GESE_2.0.1.tar.gz
Windows binaries: r-devel:GESE_2.0.1.zip, r-release:GESE_2.0.1.zip, r-oldrel:GESE_2.0.1.zip
macOS binaries: r-release (arm64):GESE_2.0.1.tgz, r-oldrel (arm64):GESE_2.0.1.tgz, r-release (x86_64):GESE_2.0.1.tgz, r-oldrel (x86_64):GESE_2.0.1.tgz
Old sources: GESE archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=GESEto link to this page.


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