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leiden: R Implementation of Leiden Clustering Algorithm

Implements the 'Python leidenalg' module to be called in R. Enables clustering using the leiden algorithm for partition a graph into communities. See the 'Python' repository for more details: <https://github.com/vtraag/leidenalg> Traag et al (2018) From Louvain to Leiden: guaranteeing well-connected communities. <doi:10.48550/arXiv.1810.08473>.

Version:0.4.3.1
Imports:methods,reticulate,Matrix,igraph (≥ 1.2.7)
Suggests:bipartite,covr,data.table,devtools,graphsim,knitr,markdown,multiplex,multinet,network,qpdf,RColorBrewer,remotes,rmarkdown,spelling,testthat,tibble
Published:2023-11-17
DOI:10.32614/CRAN.package.leiden
Author:S. Thomas Kelly [aut, cre, trl], Vincent A. Traag [com]
Maintainer:S. Thomas Kelly <tomkellygenetics at gmail.com>
BugReports:https://github.com/TomKellyGenetics/leiden/issues
License:GPL-3 | fileLICENSE
URL:https://github.com/TomKellyGenetics/leiden
NeedsCompilation:no
Language:en-US
Citation:leiden citation info
Materials:NEWS
CRAN checks:leiden results

Documentation:

Reference manual:leiden.html ,leiden.pdf
Vignettes:Benchmarking the Leiden algorithm (source,R code)
Running the Leiden algorithm with R on bipartite graphs (source,R code)
Running the Leiden algorithm with R on Graph Objects (source,R code)
Running the Leiden algorithm with R on adjacency matrices (source,R code)
Running the Leiden algorithm with R on multiplex graphs (source,R code)

Downloads:

Package source: leiden_0.4.3.1.tar.gz
Windows binaries: r-devel:leiden_0.4.3.1.zip, r-release:leiden_0.4.3.1.zip, r-oldrel:leiden_0.4.3.1.zip
macOS binaries: r-release (arm64):leiden_0.4.3.1.tgz, r-oldrel (arm64):leiden_0.4.3.1.tgz, r-release (x86_64):leiden_0.4.3.1.tgz, r-oldrel (x86_64):leiden_0.4.3.1.tgz
Old sources: leiden archive

Reverse dependencies:

Reverse imports:ClustAssess,RaceID
Reverse suggests:FCPS,MOSim

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=leidento link to this page.


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