Movatterモバイル変換

myClim 1.5.0

• The new functionmc_prep_expandtime has been added toexpand time series to shorter steps.

myClim 1.4.5

• Empty calibration parameters are now removed from joined data in themc_join function.

myClim 1.4.4

• Themc_read_data function now skips empty datafiles.
• The minimum required R version is now 4.0.

myClim 1.4.3

• The new functionmc_info_calib has been added toprovide an overview of the calibration parameters.
• The output table of themc_info function has beenextended with theheight andcalibratedcolumns.
• Themc_prep_calib function skips sensors that arealready calibrated.

myClim 1.4.2

• Only one logger can be used for uncleaned data in themc_reshape_wide function.
• The raw indexes are loaded from TOMST files to logger metadata.
• The new functionmc_prep_delete has been added.
• Theloggers parameter has been added to themc_filter function.
• The sensor without states in themc_plot_line functionhas been fixed.
• The missing states in mc_states_join have been fixed.
• The new parameterolder_newer_suffix has been added tothemc_states_join function.
• The multiple parameters can be combined in themc_filter function, ifreverse isTRUE.
• The unexistent tag issue in themc_states_replacefunction has been fixed.

myClim 1.4.1

• The calculated sensor inmc_states_join issue has beenfixed.

myClim 1.4.0

• The save localities unit test has been fixed.
• CRAN version.

myClim 1.3.11

• The numbers in theTOMS_join format can be inscientific notation.

myClim 1.3.10

• The environmentmc_read_problems with vroom parseproblems has been added.

myClim 1.3.9

• Theclean_conflict states issue in themc_prep_clean function has been fixed.
• TheNA values in themc_prep_TMSoffsoilfunction have been fixed.

myClim 1.3.8

• Thetag parameter has been added to themc_plot_line function.

myClim 1.3.7

• The uninitialsed date_format warning in themc_read_data function has been fixed.
• Thecropt_table parameter has been added to themc_prep_crop function.
• Thestart andend parameters in themc_prep_crop function can be only single value.
• Thecrop_margins_NA parameter has been added to themc_states_replace function.

myClim 1.3.6

• A new functionmc_save_localities has been added.
• The functionmc_load can load multiple files.
• The functionmc_load can load all .RDS files in adirectory.
• The warnings about missing sensors have been removed.

myClim 1.3.5

• Thelogger_name is used in themc_states_join function instead of thelogger_index as value in the states table.
• The result ofmc_prep_TMSoffsoil function has beenchanged toTRUE/FALSE instead of1/0.

myClim 1.3.4

• Thelogger_name is used in myClim object instead of thelogger_index.
• Thelogger_name is visible inmc_plot_line.
• Theshow_logger_name parameter has been added to themc_reshape_wide function.
• Theserias_name label changed toseries inmc_plot_line.
• The progress bar is added tomc_prep_crop.
• Themc_prep_clean step warning is fixed.

myClim 1.3.3

• A performance issue in themc_prep_crop function hasbeen fixed.
• The parameterstolerance andby_type havebeen added to themc_join function.
• The classmc_LocalityMetadata has been extended withthejoin_serial slot.
• The new functionmc_states_join has been added.
• The functionmc_info_join has been deleted.

myClim 1.3.2

• The parametertolerance has been added to themc_prep_clean function.
• The result table of themc_info_clean function has beenextended with thelogger_index column.
• The plot colors of sensors have been updated.
• The colors issue in themc_plot_line function has beenfixed.

myClim 1.3.1

• The conflict state issue in themc_prep_clean functionhas been fixed.

myClim 1.3.0

• Published on CRAN.

myClim 1.2.6

• New functionsmc_info_range andmc_states_outlier have been added.

myClim 1.2.5

• The issue with the HOBOlogger_type in themc_read_data function has been fixed.

myClim 1.2.4

• The multiple custom date formats issue for HOBO logger in themc_read_data function has been fixed.

myClim 1.2.3

• It is possible to define multiple custom date formats in themc_read_data function.

myClim 1.2.2

• The issue in themc_join function with theuse always newer logger option has been fixed.

myClim 1.2.1

• The new functionsmc_states_from_sensor andmc_states_to_sensor have been added.

myClim 1.2.0

• The color palette ofmc_plot_line function has beenextended.

myClim 1.1.6

• New functionmc_states_replace has been added.

myClim 1.1.5

• Updated the color palette ofmc_plot_line for greaterdifferentiation between values.

myClim 1.1.4

• Fixed the issue with the joined series of loggers in themc_plot_line function.
• Added a new parametercolor_by_logger to themc_plot_line function.
• Added a new parameterlogger_types to themc_filter function.

myClim 1.1.3

• Fixed reading of TOMST Thermologger data CSV. The data format haschanged in the new version of Lolly.

myClim 1.1.2

• Themc_prep_clean function now selects a conflictedvalue based on the best match with the new rounded date and time.
• A new parameter,resolve_conflicts, has been added tothemc_prep_clean function to allow checking uncleaneddata.
• Fixed the round-off issue of datetimes in states when anunconventional step is used.

myClim 1.1.1

• New functionsmc_info_states,mc_states_insert,mc_states_update, andmc_states_delete have been added.
• Themc_agg function now rounds states by period.

myClim 1.1.0

• Fixed an issue with the read progress bar when some files wereskipped.
• Changed the logger typeHOBO toHOBO_U23-001A.
• Added support for the logger typeHOBO_U23-004.

myClim 1.0.19

• Fixed an issue that affected the calibration table after calling themc_join() function.
• Added a file counter to themc_plot_loggers()function.

myClim 1.0.18

• Fixed temperature drift correction in themc_calc_vwc()function.
• Resolved the issue where thevroom::problems() functiondid not function properly when tidyverse was imported. This is nowhandled in the read functions.
• Disabled progress bar for thevroom::vroom()function.

myClim 1.0.17

• Multiple custom date formats can be defined for TOMST dataformat.

myClim 1.0.16

• A new function,mc_info_join(), has been added. Thisfunction attempts to join myClim objects and returns an overview of theoperation.
• The skip option has been added to themc_join()function.
• Themc_read_data() function can now read HOBO fileswhich use a comma as the decimal separator.
• The logger index has now been added to the column name in themc_reshape_wide() function.
• Progress bars have been added to themc_read_data(),mc_prep_clean(),mc_join(), andmc_agg() functions.
• When new sensors are created from a custom function in themc_agg() function, they now inherit thesensor_id from the parent sensors.
• If a wrong physical unit is input into the calc functions, it willnow result in a warning instead of an error.

myClim 1.0.15

• when readingTOMST_join format (internal TOMST dataformat used by IBOT researchers) themc_read_data()function now uses theThermo value of thelogger_type parameter when reading TOMST Termo Logger anddoes not detect the type of the logger from the data.
• A new function,mc_info_logger(), has been added. Thisfunction returns an overview table of loggers in myClim Raw-format.
• The issue with NA values in themc_join() function hasbeen fixed.
• The issue with always choices in themc_join() functionhas been fixed.
• TheTRUE value inTOMST_join is nowcorrectly detected.
• Themc_join() function does not fail if a wrong loggertype is defined.

myClim 1.0.14

• The functionmc_read_data() now skips non-existentfiles.
• Thelength() function now returns the number oflocalities formyClim object.
• Detection ofTOMST_join format is now fixed fornegative values of moisture.

myClim 1.0.13

• The issue of NA values at the beginning of TOMST_join format datafiles has been resolved.

myClim 1.0.12

• A newfacet parameter has been added to themc_plot_line() function to provide more flexibility in datavisualization.
• The y-axis labels for Boolean sensors in themc_plot_line() function have been updated toTRUE andFALSE.
• The functionmc_calib_moisture() now produces renamedresults to enhance consistency.
• The manual and vignettes have been enhanced to provide morecomprehensive and user-friendly documentation.

myClim 1.0.11

• The reading of TOMST data with a comma decimal separator wasincorrect in the 1.0.9 and 1.0.10 versions. This error has beenfixed.

myClim 1.0.10

• Dependency on the packagerunner is removed anddata.table is added as a new dependency.
• In the functionsmc_read_files() andmc_read_data(), a new parameteruser_data_formats is added for custom source file dataformats.
• A new vignette for user data formats is added.
• A check for different values in same time is added to the functionmc_prep_clean().
• A new functionmc_prep_TMSoffsoil() is added fordetecting when TMS is out of soil.

myClim 1.0.9

• The citation of the package has been changed to the articlemyClim: Microclimate data handling and standardised analyses inR.
• The reading of CSV data files is now processed by thevroom package, which provides a faster and more efficientway to read CSV data.

myClim 1.0.8

• The calibration constants for themc_calc_vwc()function are now visible to the user under new names:mc_const_CALIB_MOIST_REF_T,mc_const_CALIB_MOIST_ACOR_T, andmc_const_CALIB_MOIST_WCOR_T.
• The sensor ID constants are now visible to the user under new names:mc_const_SENSOR_*.
• Thesoiltype parameter in themc_calc_vwc() function can now be a list with user-definedparameters in the formatlist(a=number1, b=number2, c=number3).

myClim 1.0.7

• The temperature correction is no longer applied in themc_calc_vwc() function when thetemp_sensorvalue is NA.

myClim 1.0.6

• Themc_prep_crop() function now includes a newparameterlocalities, which allows for specific localitiesto be selected.
• The definitions of physicals, loggers, and sensors have beenmodified.
  • TMS_TMSmoisture ->TMS_moist
  • TS_T ->Thermo_T
  • DEND_T ->Dendro_T
  • DEND_TOMSTdendro ->Dendro_raw
  • HOBO_T_C ->HOBO_T
  • moisture ->VWC
  • RH_perc ->RH
  • wind ->wind_speed
  • deletedHOBO_T_F
• Data from HOBO loggers in °F are now automatically converted to°C.

myClim 1.0.5

• Metadata of a locality can now be loaded from a table using themc_read_data() function.
• The parameteruse_utc has been added to the followingfunctions:mc_reshape_wide(),mc_reshape_long(),mc_plot_image(),mc_plot_line() andmc_plot_raster(). Thisparameter allows for the use of local time.

myClim 1.0.4

• Updated theprint(myClim_data) function to display themetadata of themyClim object and the head of the tablefrommc_info().
• Enabled the use of the extraction operator[] toextract specific localities from themyClim object.

myClim 1.0.3

• Functionmc_plot_raster() can plot bool type sensors,such as snow.

myClim 1.0.2

• Enhanced help texts.
• Added a check inmc_prep_calib_load() to verify if thetype ofcalib_table$datetime isPOSIXct.

myClim 1.0.1

• Updated help texts to comply with CRAN rules.
• Restoredoptions andpar using theon.exit() function.
• Replacedprint() withmessage() in thecode.
• Utilized temporary directories in tests, examples, andvignettes.
• Somedontrun examples have been modified to run.
• Detection of the installed plotly package using thesystem.file() function.

myClim 1.0.0

• Improved the vignette.
• Added the ability to specify multiple TubeDB regions using theregion parameter in themc_read_tubedb()function, providing more flexibility in data retrieval.
• Automatically prepared thesensor_ids parameter in themc_read_tubedb() function even if region isNULL.
• Fixed the issue with factors in thelocalities_table inthemc_read_data() function.
• Fixed the issue with factors in thestates table in thesensor data list.
• Concluded beta testing.

myClim 0.3.1

• Deletion of duplicated items in functionmc_prep_clean() is more effective.
• The parametersensor_ids in functionmc_read_tubedb() is prepared automatically if names inTubeDB are identical with names in myClim.
• Conversion of datetimes in functionmc_read_tubedb() isfixed. The problem is in functionrTubeDB::query_timeseriesif the parameterdatetimeFormat = "POSIXct" is used.
• The issue with loading data from TubeDB when the elevation ismissing has been fixed.

myClim 0.3.0

• Behavior ofmc_filter(data, localities="locality_abc", sensors="sensor1", reverse=TRUE)has changed. Sensorsensor1 is removed only from localitylocality_abc. Other localities remain unchanged.
• Functionmc_join() is fixed. Multiple sensors with thesame height caused an error.