R/lineup2 is anR package with tools for detectingand correcting sample mix-ups between two sets of measurements, such asbetween gene expression data on two tissues. It’s a revised version oflineup, to be moregeneral and not so closely tied to theR/qtl package.
You can install R/lineup2 fromCRAN:
install.packages("lineup2")A vignette describing the use of the package is availableon the web. Or viewit from within R by loading the package and then using thevignette() function.
library(lineup2)vignette("lineup2",package="lineup2")This package is free software; you can redistribute it and/or modifyit under the terms of the GNU General Public License, version 3, aspublished by the Free Software Foundation.
This program is distributed in the hope that it will be useful, butwithout any warranty; without even the implied warranty ofmerchantability or fitness for a particular purpose. See the GNU GeneralPublic License for more details.
A copy of the GNU General Public License, version 3, is available athttps://www.r-project.org/Licenses/GPL-3