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treediff: Testing Differences Between Families of Trees

Perform test to detect differences in structure between families of trees. The method is based on cophenetic distances and aggregated Student's tests.

Version:0.2.1
Depends:R (≥ 4.0.0)
Imports:adjclust,BiocGenerics,csaw,data.table,dplyr,InteractionSet,limma, methods, stats,SummarizedExperiment,reshape2,testthat,rlang,HiCDOC,purrr
Suggests:knitr,rmarkdown
Published:2024-02-17
DOI:10.32614/CRAN.package.treediff
Author:Nathalie VialaneixORCID iD [aut, cre], Gwendaelle Cardenas [aut], Marie Chavent [aut], Sylvain Foissac [aut], Pierre NeuvialORCID iD [aut], Nathanael Randriamihamison [aut]
Maintainer:Nathalie Vialaneix <nathalie.vialaneix at inrae.fr>
BugReports:https://forgemia.inra.fr/scales/treediff/-/issues
License:GPL (≥ 3)
URL:https://forgemia.inra.fr/scales/treediff
NeedsCompilation:no
Citation:treediff citation info
Materials:NEWS
CRAN checks:treediff results

Documentation:

Reference manual:treediff.html ,treediff.pdf

Downloads:

Package source: treediff_0.2.1.tar.gz
Windows binaries: r-devel:treediff_0.2.1.zip, r-release:treediff_0.2.1.zip, r-oldrel:treediff_0.2.1.zip
macOS binaries: r-release (arm64):treediff_0.2.1.tgz, r-oldrel (arm64):treediff_0.2.1.tgz, r-release (x86_64):treediff_0.2.1.tgz, r-oldrel (x86_64):treediff_0.2.1.tgz
Old sources: treediff archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=treediffto link to this page.


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