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GEInfo: Gene-Environment Interaction Analysis Incorporating PriorInformation

Realize three approaches for Gene-Environment interaction analysis. All of them adopt Sparse Group Minimax Concave Penalty to identify important G variables and G-E interactions, and simultaneously respect the hierarchy between main G and G-E interaction effects. All the three approaches are available for Linear, Logistic, and Poisson regression. Also realize to mine and construct prior information for G variables and G-E interactions.

Version:1.0
Imports:MASS,glmnet, stats,rvest,dplyr,pheatmap, grDevices, graphics
Published:2022-01-10
DOI:10.32614/CRAN.package.GEInfo
Author:Xiaoyan Wang, Hongduo Liu, and Shuangge Ma
Maintainer:Xiaoyan Wang <xywang at hnu.edu.cn>
License:GPL-2 |GPL-3 [expanded from: GPL]
NeedsCompilation:no
CRAN checks:GEInfo results

Documentation:

Reference manual:GEInfo.html ,GEInfo.pdf

Downloads:

Package source: GEInfo_1.0.tar.gz
Windows binaries: r-devel:GEInfo_1.0.zip, r-release:GEInfo_1.0.zip, r-oldrel:GEInfo_1.0.zip
macOS binaries: r-release (arm64):GEInfo_1.0.tgz, r-oldrel (arm64):GEInfo_1.0.tgz, r-release (x86_64):GEInfo_1.0.tgz, r-oldrel (x86_64):GEInfo_1.0.tgz

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=GEInfoto link to this page.


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