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OmopSketch: Characterise Tables of an OMOP Common Data Model Instance

Summarises key information in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Assess suitability to perform specific epidemiological studies and explore the different domains to obtain feasibility counts and trends.

Version:1.0.0
Depends:R (≥ 4.1)
Imports:cli,clock,CohortConstructor (≥ 0.3.1),dplyr,lifecycle,omopgenerics (≥ 1.3.1),PatientProfiles (≥ 1.4.3),purrr,rlang,stringr,tidyr
Suggests:CDMConnector (≥ 1.3.0),CodelistGenerator,CohortCharacteristics,DBI,duckdb,DT,flextable,gt,here,knitr,lubridate,odbc,OmopViewer (≥ 0.5.0),sortable,reactable,remotes,rmarkdown,RPostgres,shinyWidgets,testthat (≥ 3.0.0),withr,omock (≥ 0.4.0),covr,ggplot2,visOmopResults (≥ 1.4.0),devtools,usethis
Published:2025-11-19
DOI:10.32614/CRAN.package.OmopSketch
Author:Marta Alcalde-HerraizORCID iD [aut], Kim Lopez-GuellORCID iD [aut], Elin RowlandsORCID iD [aut], Cecilia CampanileORCID iD [aut, cre], Edward BurnORCID iD [aut], Martí CatalàORCID iD [aut]
Maintainer:Cecilia Campanile <cecilia.campanile at ndorms.ox.ac.uk>
BugReports:https://github.com/OHDSI/OmopSketch/issues
License:Apache License (≥ 2)
URL:https://OHDSI.github.io/OmopSketch/
NeedsCompilation:no
Materials:README,NEWS
CRAN checks:OmopSketch results

Documentation:

Reference manual:OmopSketch.html ,OmopSketch.pdf
Vignettes:database characteristics (source,R code)
missing_data (source,R code)
summarise_clinical_tables_records (source,R code)
summarise_concept_id_counts (source,R code)
summarise_observation_period (source,R code)
summarise_person (source,R code)
summarise_trend (source,R code)

Downloads:

Package source: OmopSketch_1.0.0.tar.gz
Windows binaries: r-devel:OmopSketch_1.0.0.zip, r-release:OmopSketch_1.0.0.zip, r-oldrel:OmopSketch_1.0.0.zip
macOS binaries: r-release (arm64):OmopSketch_1.0.0.tgz, r-oldrel (arm64):OmopSketch_1.0.0.tgz, r-release (x86_64):OmopSketch_1.0.0.tgz, r-oldrel (x86_64):OmopSketch_0.5.1.tgz
Old sources: OmopSketch archive

Reverse dependencies:

Reverse imports:PhenotypeR
Reverse suggests:OmopConstructor,OmopOnSpark,OmopViewer

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=OmopSketchto link to this page.


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