GOCompare: Comprehensive GO Terms Comparison Between Species
Supports the assessment of functional enrichment analyses obtained for several lists of genes and provides a workflow to analyze them between two species via weighted graphs. Methods are described in Sosa et al. (2023) <doi:10.1016/j.ygeno.2022.110528>.
| Version: | 1.0.2.2 |
| Depends: | R (≥ 4.0.0) |
| Imports: | base (≥ 3.5), utils (≥ 3.5), methods (≥ 3.5), stats, grDevices,ape,vegan,ggplot2,ggrepel,igraph, parallel,stringr,mathjaxr |
| Suggests: | testthat (≥ 3.0.0) |
| Published: | 2025-06-25 |
| DOI: | 10.32614/CRAN.package.GOCompare |
| Author: | Chrystian Camilo Sosa [aut, cre, cph], Diana Carolina Clavijo-Buriticá [aut], Mauricio Alberto Quimbaya [aut], Maria Victoria Diaz [ctb], Camila Riccio Rengifo [ctb], Nicolas López-Rozo [ctb], Victor Hugo García Merchán [aut, ctb], Arlen James Mosquera [ctb], Andrés Álvarez [ctb] |
| Maintainer: | Chrystian Camilo Sosa <ccsosaa at javerianacali.edu.co> |
| BugReports: | https://github.com/ccsosa/GOCompare/issues |
| License: | GPL (≥ 3) |
| URL: | https://github.com/ccsosa/GOCompare |
| NeedsCompilation: | no |
| CRAN checks: | GOCompare results |
Documentation:
| Reference manual: | GOCompare.html ,GOCompare.pdf |
Downloads:
| Package source: | GOCompare_1.0.2.2.tar.gz |
| Windows binaries: | r-devel:GOCompare_1.0.2.2.zip, r-release:GOCompare_1.0.2.2.zip, r-oldrel:GOCompare_1.0.2.2.zip |
| macOS binaries: | r-release (arm64):GOCompare_1.0.2.2.tgz, r-oldrel (arm64):GOCompare_1.0.2.2.tgz, r-release (x86_64):GOCompare_1.0.2.2.tgz, r-oldrel (x86_64):GOCompare_1.0.2.2.tgz |
| Old sources: | GOCompare archive |
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=GOCompareto link to this page.