SkeletalVis: Exploration and Visualisation of Skeletal Transcriptomics Data
Allows search and visualisation of a collection of uniformly processed skeletal transcriptomic datasets. Includes methods to identify datasets where genes of interest are differentially expressed and find datasets with a similar gene expression pattern to a query dataset Soul J, Hardingham TE, Boot-Handford RP, Schwartz JM (2019) <doi:10.1093/bioinformatics/bty947>.
| Version: | 0.1.1 |
| Depends: | R (≥ 4.0) |
| Imports: | arrow,cowplot,dplyr,DT,ggplot2,ggrepel,httr,igraph,miniUI,pbapply,plotly,rlang,shiny, stats,tidyr, utils,visNetwork |
| Suggests: | mockery,rmarkdown,knitr,testthat (≥ 3.0.0),withr |
| Published: | 2025-05-06 |
| DOI: | 10.32614/CRAN.package.SkeletalVis |
| Author: | Jamie Soul [aut, cre, cph] |
| Maintainer: | Jamie Soul <jamie.soul at liverpool.ac.uk> |
| BugReports: | https://github.com/soulj/SkeletalVis/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/soulj/SkeletalVis |
| NeedsCompilation: | no |
| Materials: | README,NEWS |
| CRAN checks: | SkeletalVis results |
Documentation:
Downloads:
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=SkeletalVisto link to this page.