GxEScanR: Run GWAS/GWEIS Scans Using Binary Dosage Files
Tools to run genome-wide association study (GWAS) and genome-wide by environment interaction study (GWEIS) scans using the genetic data stored in a binary dosage file. The user provides a data frame with the subject's covariate data and the information about the binary dosage file returned by the BinaryDosage::getbdinfo() routine.
| Version: | 2.0.2 |
| Imports: | Rcpp (≥ 1.0.4),prodlim |
| LinkingTo: | Rcpp,RcppArmadillo |
| Suggests: | BinaryDosage,testthat (≥ 2.1.0),covr,knitr,rmarkdown |
| Published: | 2020-10-02 |
| DOI: | 10.32614/CRAN.package.GxEScanR |
| Author: | John Morrison [aut, cre], NCI [fnd] (CA196559), NCI [fnd] (CA201407), NIEHS [fnd] (ES007048), NHLBI [fnd] (HL115606) |
| Maintainer: | John Morrison <jmorr at usc.edu> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| Language: | en-US |
| Materials: | NEWS |
| CRAN checks: | GxEScanR results[issues need fixing before 2025-12-18] |
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