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wqspt: Permutation Test for Weighted Quantile Sum Regression

Implements a permutation test method for the weighted quantile sum (WQS) regression, building off the 'gWQS' package (Renzetti et al. <https://CRAN.R-project.org/package=gWQS>). Weighted quantile sum regression is a statistical technique to evaluate the effect of complex exposure mixtures on an outcome (Carrico et al. 2015 <doi:10.1007/s13253-014-0180-3>). The model features a statistical power and Type I error (i.e., false positive) rate trade-off, as there is a machine learning step to determine the weights that optimize the linear model fit. This package provides an alternative method based on a permutation test that should reliably allow for both high power and low false positive rate when utilizing WQS regression (Day et al. 2022 <doi:10.1289/EHP10570>).

Version:1.0.2
Depends:R (≥ 3.5.0)
Imports:rlang,gWQS,pbapply,ggplot2,mvtnorm,viridis,extraDistr,cowplot, methods,MASS,car,future,future.apply,pscl,reshape2,nnet
Suggests:rmarkdown,knitr,testthat (≥ 3.0.0)
Published:2025-03-05
DOI:10.32614/CRAN.package.wqspt
Author:Drew Day [aut, cre], James Peng [aut], Adam Szpiro [aut]
Maintainer:Drew Day <dday612 at gmail.com>
License:GPL-3
NeedsCompilation:no
Materials:README,NEWS
CRAN checks:wqspt results

Documentation:

Reference manual:wqspt.html ,wqspt.pdf
Vignettes:How to use the wqspt package (source,R code)

Downloads:

Package source: wqspt_1.0.2.tar.gz
Windows binaries: r-devel:wqspt_1.0.2.zip, r-release:wqspt_1.0.2.zip, r-oldrel:wqspt_1.0.2.zip
macOS binaries: r-release (arm64):wqspt_1.0.2.tgz, r-oldrel (arm64):wqspt_1.0.2.tgz, r-release (x86_64):wqspt_1.0.2.tgz, r-oldrel (x86_64):wqspt_1.0.2.tgz
Old sources: wqspt archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=wqsptto link to this page.


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