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invivoPKfit: Fits Toxicokinetic Models to In Vivo PK Data Sets

Takes in vivo toxicokinetic concentration-time data and fits parameters of 1-compartment and 2-compartment models for each chemical. These methods are described in detail in "Informatics for Toxicokinetics" (2025).

Version:2.0.2
Depends:R (≥ 4.1.0)
Imports:cli,dplyr,ggplot2,httk,MASS,Matrix,mirai,numDeriv,optimx,PK,pracma,purrr,rlang, stats,scales,tibble,tidyr
Suggests:cowplot,knitr,RColorBrewer,rmarkdown,stringr,testthat (≥ 3.0.0),glue,tidyverse
Published:2025-08-26
DOI:10.32614/CRAN.package.invivoPKfit
Author:John WambaughORCID iD [aut, cre], Caroline RingORCID iD [aut], Gilberto Padilla MercadoORCID iD [aut], Chris Cook [aut]
Maintainer:John Wambaugh <wambaugh.john at epa.gov>
License:GPL-3
NeedsCompilation:no
Materials:README,NEWS
CRAN checks:invivoPKfit results

Documentation:

Reference manual:invivoPKfit.html ,invivoPKfit.pdf
Vignettes:invivoPKfit User Guide (source,R code)
Wambaugh et al. (2018): Estimating TK Parameters from In Vivo Data (source,R code)
Informatics for toxicokinetics (source,R code)

Downloads:

Package source: invivoPKfit_2.0.2.tar.gz
Windows binaries: r-devel:invivoPKfit_2.0.2.zip, r-release:invivoPKfit_2.0.2.zip, r-oldrel:invivoPKfit_2.0.2.zip
macOS binaries: r-release (arm64):invivoPKfit_2.0.2.tgz, r-oldrel (arm64):invivoPKfit_2.0.2.tgz, r-release (x86_64):invivoPKfit_2.0.2.tgz, r-oldrel (x86_64):invivoPKfit_2.0.2.tgz
Old sources: invivoPKfit archive

Linking:

Please use the canonical formhttps://CRAN.R-project.org/package=invivoPKfitto link to this page.


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