SOHPIE: Statistical Approach via Pseudo-Value Information and Estimation
'SOHPIE' (pronounced as SOFIE) is a novel pseudo-value regression approach for differential co-abundance network analysis of microbiome data, which can include additional clinical covariate in the model. The full methodological details can be found in Ahn S and Datta S (2023) <doi:10.48550/arXiv.2303.13702>.
| Version: | 1.0.6 |
| Depends: | R (≥ 3.5.0) |
| Imports: | robustbase, parallel,dplyr,fdrtool,gtools, stats |
| Suggests: | knitr,rmarkdown,testthat (≥ 3.0.0) |
| Published: | 2023-10-23 |
| DOI: | 10.32614/CRAN.package.SOHPIE |
| Author: | Seungjun Ahn [cre, aut, trl], Somnath Datta [ctb, ths] |
| Maintainer: | Seungjun Ahn <seungjun.ahn at mountsinai.org> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Language: | en-US |
| CRAN checks: | SOHPIE results |
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