Read and manipulate genome intervals and signals. Provides functionality similar to command-line tool suites within R, enabling interactive analysis and visualization of genome-scale data. Riemondy et al. (2017) <doi:10.12688/f1000research.11997.1>.
| Version: | 0.9.0 |
| Depends: | R (≥ 4.0.0) |
| Imports: | broom,cli,cpp11bigwig,dplyr (≥ 0.8.0),ggplot2,lifecycle,readr,rlang,stringr,tibble (≥ 1.4.2) |
| LinkingTo: | cpp11 |
| Suggests: | bench,covr,cowplot,curl,DBI,dbplyr,devtools,DT,GenomicRanges,IRanges,knitr,purrr,RMariaDB,rmarkdown,S4Vectors,testthat (≥ 3.0.0),vdiffr (≥ 1.0.0),tidyr |
| Published: | 2025-12-10 |
| DOI: | 10.32614/CRAN.package.valr |
| Author: | Jay Hesselberth [aut, cre], Kent Riemondy [aut], RNA Bioscience Initiative [fnd, cph] |
| Maintainer: | Jay Hesselberth <jay.hesselberth at cuanschutz.edu> |
| BugReports: | https://github.com/rnabioco/valr/issues |
| License: | MIT + fileLICENSE |
| URL: | https://github.com/rnabioco/valr/,https://rnabioco.github.io/valr/ |
| NeedsCompilation: | yes |
| Citation: | valr citation info |
| Materials: | README,NEWS |
| In views: | Omics |
| CRAN checks: | valr results |